BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

162 related articles for article (PubMed ID: 38223254)

  • 1. Predicting metabolomic profiles from microbial composition through neural ordinary differential equations.
    Wang T; Wang XW; Lee-Sarwar KA; Litonjua AA; Weiss ST; Sun Y; Maslov S; Liu YY
    Nat Mach Intell; 2023 Mar; 5(3):284-293. PubMed ID: 38223254
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Metabolic Model-Based Integration of Microbiome Taxonomic and Metabolomic Profiles Elucidates Mechanistic Links between Ecological and Metabolic Variation.
    Noecker C; Eng A; Srinivasan S; Theriot CM; Young VB; Jansson JK; Fredricks DN; Borenstein E
    mSystems; 2016; 1(1):. PubMed ID: 27239563
    [TBL] [Abstract][Full Text] [Related]  

  • 3. A metabolomic view of how the human gut microbiota impacts the host metabolome using humanized and gnotobiotic mice.
    Marcobal A; Kashyap PC; Nelson TA; Aronov PA; Donia MS; Spormann A; Fischbach MA; Sonnenburg JL
    ISME J; 2013 Oct; 7(10):1933-43. PubMed ID: 23739052
    [TBL] [Abstract][Full Text] [Related]  

  • 4. A Comparative Evaluation of Tools to Predict Metabolite Profiles From Microbiome Sequencing Data.
    Yin X; Altman T; Rutherford E; West KA; Wu Y; Choi J; Beck PL; Kaplan GG; Dabbagh K; DeSantis TZ; Iwai S
    Front Microbiol; 2020; 11():595910. PubMed ID: 33343536
    [TBL] [Abstract][Full Text] [Related]  

  • 5. MMINP: A computational framework of microbe-metabolite interactions-based metabolic profiles predictor based on the O2-PLS algorithm.
    Tang W; Zheng H; Xu S; Li P; Zhan L; Luo X; Dai Z; Wang Q; Yu G
    Gut Microbes; 2023; 15(1):2223349. PubMed ID: 37306408
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Predicting metabolic response to dietary intervention using deep learning.
    Wang T; Holscher HD; Maslov S; Hu FB; Weiss ST; Liu YY
    bioRxiv; 2023 Mar; ():. PubMed ID: 36993761
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Ecology-guided prediction of cross-feeding interactions in the human gut microbiome.
    Goyal A; Wang T; Dubinkina V; Maslov S
    Nat Commun; 2021 Feb; 12(1):1335. PubMed ID: 33637740
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Cervicovaginal Microbiome Composition Is Associated with Metabolic Profiles in Healthy Pregnancy.
    Oliver A; LaMere B; Weihe C; Wandro S; Lindsay KL; Wadhwa PD; Mills DA; Pride DT; Fiehn O; Northen T; de Raad M; Li H; Martiny JBH; Lynch S; Whiteson K
    mBio; 2020 Aug; 11(4):. PubMed ID: 32843557
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Improved Metabolite Prediction Using Microbiome Data-Based Elastic Net Models.
    Xie J; Cho H; Lin BM; Pillai M; Heimisdottir LH; Bandyopadhyay D; Zou F; Roach J; Divaris K; Wu D
    Front Cell Infect Microbiol; 2021; 11():734416. PubMed ID: 34760716
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Metabolomics approaches for characterizing metabolic interactions between host and its commensal microbes.
    Xie G; Zhang S; Zheng X; Jia W
    Electrophoresis; 2013 Oct; 34(19):2787-98. PubMed ID: 23775228
    [TBL] [Abstract][Full Text] [Related]  

  • 11. TaxiBGC: a Taxonomy-Guided Approach for Profiling Experimentally Characterized Microbial Biosynthetic Gene Clusters and Secondary Metabolite Production Potential in Metagenomes.
    Gupta VK; Bakshi U; Chang D; Lee AR; Davis JM; Chandrasekaran S; Jin YS; Freeman MF; Sung J
    mSystems; 2022 Dec; 7(6):e0092522. PubMed ID: 36378489
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Combining mechanism-based prediction with patient-based profiling for psoriasis metabolomics biomarker discovery.
    Wang Q; McCormick TS; Ward NL; Cooper KD; Conic R; Xu R
    AMIA Annu Symp Proc; 2017; 2017():1734-1743. PubMed ID: 29854244
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Seasonal Dietary Shifts Alter the Gut Microbiota of Avivorous Bats: Implication for Adaptation to Energy Harvest and Nutritional Utilization.
    Gong L; Liu B; Wu H; Feng J; Jiang T
    mSphere; 2021 Aug; 6(4):e0046721. PubMed ID: 34346703
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Microbiome Metabolome Integration Platform (MMIP): a web-based platform for microbiome and metabolome data integration and feature identification.
    Gautam A; Bhowmik D; Basu S; Zeng W; Lahiri A; Huson DH; Paul S
    Brief Bioinform; 2023 Sep; 24(6):. PubMed ID: 37771003
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Fish Skin and Gut Microbiomes Show Contrasting Signatures of Host Species and Habitat.
    Sylvain FÉ; Holland A; Bouslama S; Audet-Gilbert É; Lavoie C; Val AL; Derome N
    Appl Environ Microbiol; 2020 Aug; 86(16):. PubMed ID: 32503908
    [TBL] [Abstract][Full Text] [Related]  

  • 16. A specific gut microbiota and metabolomic profiles shifts related to antidiabetic action: The similar and complementary antidiabetic properties of type 3 resistant starch from Canna edulis and metformin.
    Zhang C; Ma S; Wu J; Luo L; Qiao S; Li R; Xu W; Wang N; Zhao B; Wang X; Zhang Y; Wang X
    Pharmacol Res; 2020 Sep; 159():104985. PubMed ID: 32504839
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Defining and Evaluating Microbial Contributions to Metabolite Variation in Microbiome-Metabolome Association Studies.
    Noecker C; Chiu HC; McNally CP; Borenstein E
    mSystems; 2019 Dec; 4(6):. PubMed ID: 31848305
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Postmortem Skeletal Microbial Community Composition and Function in Buried Human Remains.
    Emmons AL; Mundorff AZ; Hoeland KM; Davoren J; Keenan SW; Carter DO; Campagna SR; DeBruyn JM
    mSystems; 2022 Apr; 7(2):e0004122. PubMed ID: 35353006
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Metabolomic signatures and microbial community profiling of depressive rat model induced by adrenocorticotrophic hormone.
    Song J; Ma W; Gu X; Zhao L; Jiang J; Xu Y; Zhang L; Zhou M; Yang L
    J Transl Med; 2019 Jul; 17(1):224. PubMed ID: 31307473
    [TBL] [Abstract][Full Text] [Related]  

  • 20.
    ; ; . PubMed ID:
    [No Abstract]   [Full Text] [Related]  

    [Next]    [New Search]
    of 9.