These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

101 related articles for article (PubMed ID: 38316773)

  • 61. De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis.
    Haas BJ; Papanicolaou A; Yassour M; Grabherr M; Blood PD; Bowden J; Couger MB; Eccles D; Li B; Lieber M; MacManes MD; Ott M; Orvis J; Pochet N; Strozzi F; Weeks N; Westerman R; William T; Dewey CN; Henschel R; LeDuc RD; Friedman N; Regev A
    Nat Protoc; 2013 Aug; 8(8):1494-512. PubMed ID: 23845962
    [TBL] [Abstract][Full Text] [Related]  

  • 62. Challenges in homology search: HMMER3 and convergent evolution of coiled-coil regions.
    Mistry J; Finn RD; Eddy SR; Bateman A; Punta M
    Nucleic Acids Res; 2013 Jul; 41(12):e121. PubMed ID: 23598997
    [TBL] [Abstract][Full Text] [Related]  

  • 63. Caenorhabditis elegans POT-1 and POT-2 repress telomere maintenance pathways.
    Shtessel L; Lowden MR; Cheng C; Simon M; Wang K; Ahmed S
    G3 (Bethesda); 2013 Feb; 3(2):305-13. PubMed ID: 23390606
    [TBL] [Abstract][Full Text] [Related]  

  • 64. MAFFT multiple sequence alignment software version 7: improvements in performance and usability.
    Katoh K; Standley DM
    Mol Biol Evol; 2013 Apr; 30(4):772-80. PubMed ID: 23329690
    [TBL] [Abstract][Full Text] [Related]  

  • 65. MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity.
    Wang Y; Tang H; Debarry JD; Tan X; Li J; Wang X; Lee TH; Jin H; Marler B; Guo H; Kissinger JC; Paterson AH
    Nucleic Acids Res; 2012 Apr; 40(7):e49. PubMed ID: 22217600
    [TBL] [Abstract][Full Text] [Related]  

  • 66. Accelerated Profile HMM Searches.
    Eddy SR
    PLoS Comput Biol; 2011 Oct; 7(10):e1002195. PubMed ID: 22039361
    [TBL] [Abstract][Full Text] [Related]  

  • 67. Terminin: a protein complex that mediates epigenetic maintenance of Drosophila telomeres.
    Raffa GD; Ciapponi L; Cenci G; Gatti M
    Nucleus; 2011; 2(5):383-91. PubMed ID: 21989238
    [TBL] [Abstract][Full Text] [Related]  

  • 68. A fast, lock-free approach for efficient parallel counting of occurrences of k-mers.
    Marçais G; Kingsford C
    Bioinformatics; 2011 Mar; 27(6):764-70. PubMed ID: 21217122
    [TBL] [Abstract][Full Text] [Related]  

  • 69. BLAST+: architecture and applications.
    Camacho C; Coulouris G; Avagyan V; Ma N; Papadopoulos J; Bealer K; Madden TL
    BMC Bioinformatics; 2009 Dec; 10():421. PubMed ID: 20003500
    [TBL] [Abstract][Full Text] [Related]  

  • 70. The MRT-1 nuclease is required for DNA crosslink repair and telomerase activity in vivo in Caenorhabditis elegans.
    Meier B; Barber LJ; Liu Y; Shtessel L; Boulton SJ; Gartner A; Ahmed S
    EMBO J; 2009 Nov; 28(22):3549-63. PubMed ID: 19779462
    [TBL] [Abstract][Full Text] [Related]  

  • 71. Functional dissection of Caenorhabditis elegans CLK-2/TEL2 cell cycle defects during embryogenesis and germline development.
    Moser SC; von Elsner S; Büssing I; Alpi A; Schnabel R; Gartner A
    PLoS Genet; 2009 Apr; 5(4):e1000451. PubMed ID: 19360121
    [TBL] [Abstract][Full Text] [Related]  

  • 72. C. elegans telomeres contain G-strand and C-strand overhangs that are bound by distinct proteins.
    Raices M; Verdun RE; Compton SA; Haggblom CI; Griffith JD; Dillin A; Karlseder J
    Cell; 2008 Mar; 132(5):745-57. PubMed ID: 18329362
    [TBL] [Abstract][Full Text] [Related]  

  • 73. SOAP: short oligonucleotide alignment program.
    Li R; Li Y; Kristiansen K; Wang J
    Bioinformatics; 2008 Mar; 24(5):713-4. PubMed ID: 18227114
    [TBL] [Abstract][Full Text] [Related]  

  • 74. Primer3Plus, an enhanced web interface to Primer3.
    Untergasser A; Nijveen H; Rao X; Bisseling T; Geurts R; Leunissen JA
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W71-4. PubMed ID: 17485472
    [TBL] [Abstract][Full Text] [Related]  

  • 75. CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes.
    Parra G; Bradnam K; Korf I
    Bioinformatics; 2007 May; 23(9):1061-7. PubMed ID: 17332020
    [TBL] [Abstract][Full Text] [Related]  

  • 76. High conservation of the differentially amplified MPA2 satellite DNA family in parthenogenetic root-knot nematodes.
    Mestrović N; Castagnone-Sereno P; Plohl M
    Gene; 2006 Jul; 376(2):260-7. PubMed ID: 16765538
    [TBL] [Abstract][Full Text] [Related]  

  • 77. Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences.
    Li W; Godzik A
    Bioinformatics; 2006 Jul; 22(13):1658-9. PubMed ID: 16731699
    [TBL] [Abstract][Full Text] [Related]  

  • 78. GMAP: a genomic mapping and alignment program for mRNA and EST sequences.
    Wu TD; Watanabe CK
    Bioinformatics; 2005 May; 21(9):1859-75. PubMed ID: 15728110
    [TBL] [Abstract][Full Text] [Related]  

  • 79. Are Drosophila telomeres an exception or the rule?
    Louis EJ
    Genome Biol; 2002 Sep; 3(10):REVIEWS0007. PubMed ID: 12372147
    [TBL] [Abstract][Full Text] [Related]  

  • 80. C. elegans RAD-5/CLK-2 defines a new DNA damage checkpoint protein.
    Ahmed S; Alpi A; Hengartner MO; Gartner A
    Curr Biol; 2001 Dec; 11(24):1934-44. PubMed ID: 11747819
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 6.