190 related articles for article (PubMed ID: 38316926)
1. microbeMASST: a taxonomically informed mass spectrometry search tool for microbial metabolomics data.
Zuffa S; Schmid R; Bauermeister A; P Gomes PW; Caraballo-Rodriguez AM; El Abiead Y; Aron AT; Gentry EC; Zemlin J; Meehan MJ; Avalon NE; Cichewicz RH; Buzun E; Terrazas MC; Hsu CY; Oles R; Ayala AV; Zhao J; Chu H; Kuijpers MCM; Jackrel SL; Tugizimana F; Nephali LP; Dubery IA; Madala NE; Moreira EA; Costa-Lotufo LV; Lopes NP; Rezende-Teixeira P; Jimenez PC; Rimal B; Patterson AD; Traxler MF; Pessotti RC; Alvarado-Villalobos D; Tamayo-Castillo G; Chaverri P; Escudero-Leyva E; Quiros-Guerrero LM; Bory AJ; Joubert J; Rutz A; Wolfender JL; Allard PM; Sichert A; Pontrelli S; Pullman BS; Bandeira N; Gerwick WH; Gindro K; Massana-Codina J; Wagner BC; Forchhammer K; Petras D; Aiosa N; Garg N; Liebeke M; Bourceau P; Kang KB; Gadhavi H; de Carvalho LPS; Silva Dos Santos M; Pérez-Lorente AI; Molina-Santiago C; Romero D; Franke R; Brönstrup M; Vera Ponce de León A; Pope PB; La Rosa SL; La Barbera G; Roager HM; Laursen MF; Hammerle F; Siewert B; Peintner U; Licona-Cassani C; Rodriguez-Orduña L; Rampler E; Hildebrand F; Koellensperger G; Schoeny H; Hohenwallner K; Panzenboeck L; Gregor R; O'Neill EC; Roxborough ET; Odoi J; Bale NJ; Ding S; Sinninghe Damsté JS; Guan XL; Cui JJ; Ju KS; Silva DB; Silva FMR; da Silva GF; Koolen HHF; Grundmann C; Clement JA; Mohimani H; Broders K; McPhail KL; Ober-Singleton SE; Rath CM; McDonald D; Knight R; Wang M; Dorrestein PC
Nat Microbiol; 2024 Feb; 9(2):336-345. PubMed ID: 38316926
[TBL] [Abstract][Full Text] [Related]
2. A Taxonomically-informed Mass Spectrometry Search Tool for Microbial Metabolomics Data.
Zuffa S; Schmid R; Bauermeister A; Gomes PWP; Caraballo-Rodriguez AM; Abiead YE; Aron AT; Gentry EC; Zemlin J; Meehan MJ; Avalon NE; Cichewicz RH; Buzun E; Terrazas MC; Hsu CY; Oles R; Ayala AV; Zhao J; Chu H; Kuijpers MCM; Jackrel SL; Tugizimana F; Nephali LP; Dubery IA; Madala NE; Moreira EA; Costa-Lotufo LV; Lopes NP; Rezende-Teixeira P; Jimenez PC; Rimal B; Patterson AD; Traxler MF; de Cassia Pessotti R; Alvarado-Villalobos D; Tamayo-Castillo G; Chaverri P; Escudero-Leyva E; Quiros-Guerrero LM; Bory AJ; Joubert J; Rutz A; Wolfender JL; Allard PM; Sichert A; Pontrelli S; Pullman BS; Bandeira N; Gerwick WH; Gindro K; Massana-Codina J; Wagner BC; Forchhammer K; Petras D; Aiosa N; Garg N; Liebeke M; Bourceau P; Kang KB; Gadhavi H; de Carvalho LPS; Dos Santos MS; Pérez-Lorente AI; Molina-Santiago C; Romero D; Franke R; Brönstrup M; de León AVP; Pope PB; Rosa SL; Barbera G; Roager HM; Laursen MF; Hammerle F; Siewert B; Peintner U; Licona-Cassani C; Rodriguez-Orduña L; Rampler E; Hildebrand F; Koellensperger G; Schoeny H; Hohenwallner K; Panzenboeck L; Gregor R; O'Neill EC; Roxborough ET; Odoi J; Bale NJ; Ding S; Sinninghe Damsté JS; Guan XL; Cui JJ; Ju KS; Silva DB; Silva FMR; da Silva GF; Koolen HHF; Grundmann C; Clement JA; Mohimani H; Broders K; McPhail KL; Ober-Singleton SE; Rath CM; McDonald D; Knight R; Wang M; Dorrestein PC
Res Sq; 2023 Aug; ():. PubMed ID: 37577622
[TBL] [Abstract][Full Text] [Related]
3. METLIN: A Tandem Mass Spectral Library of Standards.
Montenegro-Burke JR; Guijas C; Siuzdak G
Methods Mol Biol; 2020; 2104():149-163. PubMed ID: 31953817
[TBL] [Abstract][Full Text] [Related]
4. Overview of Tandem Mass Spectral and Metabolite Databases for Metabolite Identification in Metabolomics.
Yi Z; Zhu ZJ
Methods Mol Biol; 2020; 2104():139-148. PubMed ID: 31953816
[TBL] [Abstract][Full Text] [Related]
5. Enhancing confidence of metabolite annotation in Capillary Electrophoresis-Mass Spectrometry untargeted metabolomics with relative migration time and in-source fragmentation.
Mamani-Huanca M; de la Fuente AG; Otero A; Gradillas A; Godzien J; Barbas C; López-Gonzálvez Á
J Chromatogr A; 2021 Jan; 1635():461758. PubMed ID: 33302137
[TBL] [Abstract][Full Text] [Related]
6. Autonomous METLIN-Guided In-source Fragment Annotation for Untargeted Metabolomics.
Domingo-Almenara X; Montenegro-Burke JR; Guijas C; Majumder EL; Benton HP; Siuzdak G
Anal Chem; 2019 Mar; 91(5):3246-3253. PubMed ID: 30681830
[TBL] [Abstract][Full Text] [Related]
7. MIDAS: a database-searching algorithm for metabolite identification in metabolomics.
Wang Y; Kora G; Bowen BP; Pan C
Anal Chem; 2014 Oct; 86(19):9496-503. PubMed ID: 25157598
[TBL] [Abstract][Full Text] [Related]
8. Functional metabolomics of the human scalp: a metabolic niche for
Nothias L-F; Schmid R; Garlet A; Cameron H; Leoty-Okombi S; André-Frei V; Fuchs R; Dorrestein PC; Ternes P
mSystems; 2024 Feb; 9(2):e0035623. PubMed ID: 38206014
[TBL] [Abstract][Full Text] [Related]
9. MyCompoundID MS/MS Search: Metabolite Identification Using a Library of Predicted Fragment-Ion-Spectra of 383,830 Possible Human Metabolites.
Huan T; Tang C; Li R; Shi Y; Lin G; Li L
Anal Chem; 2015 Oct; 87(20):10619-26. PubMed ID: 26415007
[TBL] [Abstract][Full Text] [Related]
10. Metabolomic spectral libraries for data-independent SWATH liquid chromatography mass spectrometry acquisition.
Bruderer T; Varesio E; Hidasi AO; Duchoslav E; Burton L; Bonner R; Hopfgartner G
Anal Bioanal Chem; 2018 Mar; 410(7):1873-1884. PubMed ID: 29411086
[TBL] [Abstract][Full Text] [Related]
11. Retrieving and Utilizing Hypothetical Neutral Losses from Tandem Mass Spectra for Spectral Similarity Analysis and Unknown Metabolite Annotation.
Xing S; Hu Y; Yin Z; Liu M; Tang X; Fang M; Huan T
Anal Chem; 2020 Nov; 92(21):14476-14483. PubMed ID: 33076659
[TBL] [Abstract][Full Text] [Related]
12. Advancing untargeted metabolomics using data-independent acquisition mass spectrometry technology.
Wang R; Yin Y; Zhu ZJ
Anal Bioanal Chem; 2019 Jul; 411(19):4349-4357. PubMed ID: 30847570
[TBL] [Abstract][Full Text] [Related]
13. Proposal for a chemically consistent way to annotate ions arising from the analysis of reference compounds under ESI conditions: A prerequisite to proper mass spectral database constitution in metabolomics.
Damont A; Olivier MF; Warnet A; Lyan B; Pujos-Guillot E; Jamin EL; Debrauwer L; Bernillon S; Junot C; Tabet JC; Fenaille F
J Mass Spectrom; 2019 Jun; 54(6):567-582. PubMed ID: 31083780
[TBL] [Abstract][Full Text] [Related]
14. PRIMe Update: innovative content for plant metabolomics and integration of gene expression and metabolite accumulation.
Sakurai T; Yamada Y; Sawada Y; Matsuda F; Akiyama K; Shinozaki K; Hirai MY; Saito K
Plant Cell Physiol; 2013 Feb; 54(2):e5. PubMed ID: 23292601
[TBL] [Abstract][Full Text] [Related]
15. Incorporating In-Source Fragment Information Improves Metabolite Identification Accuracy in Untargeted LC-MS Data Sets.
Seitzer PM; Searle BC
J Proteome Res; 2019 Feb; 18(2):791-796. PubMed ID: 30295490
[TBL] [Abstract][Full Text] [Related]
16. MetFID: artificial neural network-based compound fingerprint prediction for metabolite annotation.
Fan Z; Alley A; Ghaffari K; Ressom HW
Metabolomics; 2020 Sep; 16(10):104. PubMed ID: 32997169
[TBL] [Abstract][Full Text] [Related]
17. A Structure-Guided Molecular Network Strategy for Global Untargeted Metabolomics Data Annotation.
Wang X; Li C; Li Z; Qi Y; Zhang X; Zhao X; Zhao C; Lin X; Lu X; Xu G
Anal Chem; 2023 Aug; 95(31):11603-11612. PubMed ID: 37493263
[TBL] [Abstract][Full Text] [Related]
18. ChemDistiller: an engine for metabolite annotation in mass spectrometry.
Laponogov I; Sadawi N; Galea D; Mirnezami R; Veselkov KA
Bioinformatics; 2018 Jun; 34(12):2096-2102. PubMed ID: 29447341
[TBL] [Abstract][Full Text] [Related]
19. MS2Compound: A User-Friendly Compound Identification Tool for LC-MS/MS-Based Metabolomics Data.
Behera SK; Kasaragod S; Karthikkeyan G; Narayana Kotimoole C; Raju R; Prasad TSK; Subbannayya Y
OMICS; 2021 Jun; 25(6):389-399. PubMed ID: 34115523
[TBL] [Abstract][Full Text] [Related]
20. Metabolite identification using automated comparison of high-resolution multistage mass spectral trees.
Rojas-Cherto M; Peironcely JE; Kasper PT; van der Hooft JJ; de Vos RC; Vreeken R; Hankemeier T; Reijmers T
Anal Chem; 2012 Jul; 84(13):5524-34. PubMed ID: 22612383
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
