179 related articles for article (PubMed ID: 38336771)
1. Tissue of origin prediction for cancer of unknown primary using a targeted methylation sequencing panel.
Sun M; Xu B; Chen C; Zhu Y; Li X; Chen K
Clin Epigenetics; 2024 Feb; 16(1):25. PubMed ID: 38336771
[TBL] [Abstract][Full Text] [Related]
2. CUP-AI-Dx: A tool for inferring cancer tissue of origin and molecular subtype using RNA gene-expression data and artificial intelligence.
Zhao Y; Pan Z; Namburi S; Pattison A; Posner A; Balachander S; Paisie CA; Reddi HV; Rueter J; Gill AJ; Fox S; Raghav KPS; Flynn WF; Tothill RW; Li S; Karuturi RKM; George J
EBioMedicine; 2020 Nov; 61():103030. PubMed ID: 33039710
[TBL] [Abstract][Full Text] [Related]
3. Identification of tissue of origin in cancer of unknown primary using a targeted bisulfite sequencing panel.
Bae JM; Ahn JY; Lee H; Jang H; Han H; Jeong J; Cho NY; Kim K; Kang GH
Epigenomics; 2022 May; 14(10):615-628. PubMed ID: 35473295
[TBL] [Abstract][Full Text] [Related]
4. DNA methylation profiling to determine the primary sites of metastatic cancers using formalin-fixed paraffin-embedded tissues.
Zhang S; He S; Zhu X; Wang Y; Xie Q; Song X; Xu C; Wang W; Xing L; Xia C; Wang Q; Li W; Zhang X; Yu J; Ma S; Shi J; Gu H
Nat Commun; 2023 Sep; 14(1):5686. PubMed ID: 37709764
[TBL] [Abstract][Full Text] [Related]
5. TOD-CUP: a gene expression rank-based majority vote algorithm for tissue origin diagnosis of cancers of unknown primary.
Shen Y; Chu Q; Yin X; He Y; Bai P; Wang Y; Fang W; Timko MP; Fan L; Jiang W
Brief Bioinform; 2021 Mar; 22(2):2106-2118. PubMed ID: 32266390
[TBL] [Abstract][Full Text] [Related]
6. A molecular approach integrating genomic and DNA methylation profiling for tissue of origin identification in lung-specific cancer of unknown primary.
Chen K; Zhang F; Yu X; Huang Z; Gong L; Xu Y; Li H; Yu S; Fan Y
J Transl Med; 2022 Apr; 20(1):158. PubMed ID: 35382836
[TBL] [Abstract][Full Text] [Related]
7. An expression-based site of origin diagnostic method designed for clinical application to cancer of unknown origin.
Tothill RW; Kowalczyk A; Rischin D; Bousioutas A; Haviv I; van Laar RK; Waring PM; Zalcberg J; Ward R; Biankin AV; Sutherland RL; Henshall SM; Fong K; Pollack JR; Bowtell DD; Holloway AJ
Cancer Res; 2005 May; 65(10):4031-40. PubMed ID: 15899792
[TBL] [Abstract][Full Text] [Related]
8. Interpretation of genome-wide infinium methylation data from ligated DNA in formalin-fixed, paraffin-embedded paired tumor and normal tissue.
Jasmine F; Rahaman R; Roy S; Raza M; Paul R; Rakibuz-Zaman M; Paul-Brutus R; Dodsworth C; Kamal M; Ahsan H; Kibriya MG
BMC Res Notes; 2012 Feb; 5():117. PubMed ID: 22357164
[TBL] [Abstract][Full Text] [Related]
9. Evaluating DNA Methylation, Gene Expression, Somatic Mutation, and Their Combinations in Inferring Tumor Tissue-of-Origin.
Liu H; Qiu C; Wang B; Bing P; Tian G; Zhang X; Ma J; He B; Yang J
Front Cell Dev Biol; 2021; 9():619330. PubMed ID: 34012960
[TBL] [Abstract][Full Text] [Related]
10. Development and validation of a gene expression tumour classifier for cancer of unknown primary.
Tothill RW; Shi F; Paiman L; Bedo J; Kowalczyk A; Mileshkin L; Buela E; Klupacs R; Bowtell D; Byron K
Pathology; 2015 Jan; 47(1):7-12. PubMed ID: 25485653
[TBL] [Abstract][Full Text] [Related]
11. Targeted bisulfite sequencing identified a panel of DNA methylation-based biomarkers for esophageal squamous cell carcinoma (ESCC).
Pu W; Wang C; Chen S; Zhao D; Zhou Y; Ma Y; Wang Y; Li C; Huang Z; Jin L; Guo S; Wang J; Wang M
Clin Epigenetics; 2017; 9():129. PubMed ID: 29270239
[TBL] [Abstract][Full Text] [Related]
12. Analysis of the breast cancer methylome using formalin-fixed paraffin-embedded tumour.
Wong EM; Joo JE; McLean CA; Baglietto L; English DR; Severi G; Wu HC; Terry MB; Hopper JL; Milne RL; Giles GG; Southey MC
Breast Cancer Res Treat; 2016 Nov; 160(1):173-180. PubMed ID: 27604360
[TBL] [Abstract][Full Text] [Related]
13. Validation of the MethylationEPIC BeadChip for fresh-frozen and formalin-fixed paraffin-embedded tumours.
Kling T; Wenger A; Beck S; Carén H
Clin Epigenetics; 2017; 9():33. PubMed ID: 28392843
[TBL] [Abstract][Full Text] [Related]
14. Genome-wide DNA methylation analysis of formalin-fixed paraffin embedded colorectal cancer tissue.
Dumenil TD; Wockner LF; Bettington M; McKeone DM; Klein K; Bowdler LM; Montgomery GW; Leggett BA; Whitehall VL
Genes Chromosomes Cancer; 2014 Jul; 53(7):537-48. PubMed ID: 24677610
[TBL] [Abstract][Full Text] [Related]
15. Genome-wide DNA methylation profiling in human breast tissue by Illumina TruSeq methyl capture EPIC sequencing and infinium methylationEPIC beadchip microarray.
Lin N; Liu J; Castle J; Wan J; Shendre A; Liu Y; Wang C; He C
Epigenetics; 2021; 16(7):754-769. PubMed ID: 33048617
[TBL] [Abstract][Full Text] [Related]
16. Validation of a microRNA-based qRT-PCR test for accurate identification of tumor tissue origin.
Rosenwald S; Gilad S; Benjamin S; Lebanony D; Dromi N; Faerman A; Benjamin H; Tamir R; Ezagouri M; Goren E; Barshack I; Nass D; Tobar A; Feinmesser M; Rosenfeld N; Leizerman I; Ashkenazi K; Spector Y; Chajut A; Aharonov R
Mod Pathol; 2010 Jun; 23(6):814-23. PubMed ID: 20348879
[TBL] [Abstract][Full Text] [Related]
17. Epigenetic profiling to classify cancer of unknown primary: a multicentre, retrospective analysis.
Moran S; Martínez-Cardús A; Sayols S; Musulén E; Balañá C; Estival-Gonzalez A; Moutinho C; Heyn H; Diaz-Lagares A; de Moura MC; Stella GM; Comoglio PM; Ruiz-Miró M; Matias-Guiu X; Pazo-Cid R; Antón A; Lopez-Lopez R; Soler G; Longo F; Guerra I; Fernandez S; Assenov Y; Plass C; Morales R; Carles J; Bowtell D; Mileshkin L; Sia D; Tothill R; Tabernero J; Llovet JM; Esteller M
Lancet Oncol; 2016 Oct; 17(10):1386-1395. PubMed ID: 27575023
[TBL] [Abstract][Full Text] [Related]
18. MicroRNA profiling for the identification of cancers with unknown primary tissue-of-origin.
Ferracin M; Pedriali M; Veronese A; Zagatti B; Gafà R; Magri E; Lunardi M; Munerato G; Querzoli G; Maestri I; Ulazzi L; Nenci I; Croce CM; Lanza G; Querzoli P; Negrini M
J Pathol; 2011 Sep; 225(1):43-53. PubMed ID: 21630269
[TBL] [Abstract][Full Text] [Related]
19. Formamide as a denaturant for bisulfite conversion of genomic DNA: Bisulfite sequencing of the GSTPi and RARbeta2 genes of 43 formalin-fixed paraffin-embedded prostate cancer specimens.
Zon G; Barker MA; Kaur P; Groshen S; Jones LW; Imam SA; Boyd VL
Anal Biochem; 2009 Sep; 392(2):117-25. PubMed ID: 19505431
[TBL] [Abstract][Full Text] [Related]
20. A machine learning framework to trace tumor tissue-of-origin of 13 types of cancer based on DNA somatic mutation.
He B; Dai C; Lang J; Bing P; Tian G; Wang B; Yang J
Biochim Biophys Acta Mol Basis Dis; 2020 Nov; 1866(11):165916. PubMed ID: 32771416
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
