These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

155 related articles for article (PubMed ID: 38338663)

  • 1. Structural and Dynamic-Based Characterization of the Recognition Patterns of E7 and TRP-2 Epitopes by MHC Class I Receptors through Computational Approaches.
    Balasco N; Tagliamonte M; Buonaguro L; Vitagliano L; Paladino A
    Int J Mol Sci; 2024 Jan; 25(3):. PubMed ID: 38338663
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Towards universal structure-based prediction of class II MHC epitopes for diverse allotypes.
    Bordner AJ
    PLoS One; 2010 Dec; 5(12):e14383. PubMed ID: 21187956
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Structural analysis of two HLA-DR-presented autoantigenic epitopes: crucial role of peripheral but not central peptide residues for T-cell receptor recognition.
    De Oliveira DB; Harfouch-Hammoud E; Otto H; Papandreou NA; Stern LJ; Cohen H; Boehm BO; Bach J; Caillat-Zucman S; Walk T; Jung G; Eliopoulos E; Papadopoulos GK; van Endert PM
    Mol Immunol; 2000 Oct; 37(14):813-25. PubMed ID: 11257303
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Systematically benchmarking peptide-MHC binding predictors: From synthetic to naturally processed epitopes.
    Zhao W; Sher X
    PLoS Comput Biol; 2018 Nov; 14(11):e1006457. PubMed ID: 30408041
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Elucidating the immunological effects of 5-azacytidine treatment in patients with myelodysplastic syndrome and identifying new conditional ligands and T-cell epitopes of relevance in melanoma.
    Frøsig TM
    Dan Med J; 2015 Aug; 62(8):B5144. PubMed ID: 26239596
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Molecular dynamics simulations to provide insights into epitopes coupled to the soluble and membrane-bound MHC-II complexes.
    Bello M; Correa-Basurto J
    PLoS One; 2013; 8(8):e72575. PubMed ID: 23977319
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Competition inhibition of cytotoxic T-lymphocyte (CTL) lysis, a more sensitive method to identify candidate CTL epitopes than induction of antibody-detected MHC class I stabilization.
    Feltkamp MC; Vierboom MP; Toes RE; Ossendorp F; ter Schegget J; Melief CJ; Kast WM
    Immunol Lett; 1995; 47(1-2):1-8. PubMed ID: 8537084
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Limitations of predictive motifs revealed by cytotoxic T lymphocyte epitope mapping of the human papilloma virus E7 protein.
    Sadovnikova E; Zhu X; Collins SM; Zhou J; Vousden K; Crawford L; Beverley P; Stauss HJ
    Int Immunol; 1994 Feb; 6(2):289-96. PubMed ID: 7512375
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Peptide vaccination with an anchor-replaced CTL epitope protects against human papillomavirus type 16-induced tumors expressing the wild-type epitope.
    Vierboom MP; Feltkamp MC; Neisig A; Drijfhout JW; ter Schegget J; Neefjes JJ; Melief CJ; Kast WM
    J Immunother; 1998 Nov; 21(6):399-408. PubMed ID: 9807734
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Characterizing immunodominant and protective influenza hemagglutinin epitopes by functional activity and relative binding to major histocompatibility complex class II sites.
    Rajnavölgyi E; Horváth A; Gogolák P; Tóth GK; Fazekas G; Fridkin M; Pecht I
    Eur J Immunol; 1997 Dec; 27(12):3105-14. PubMed ID: 9464794
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Prediction of MHC class II binding affinity using SMM-align, a novel stabilization matrix alignment method.
    Nielsen M; Lundegaard C; Lund O
    BMC Bioinformatics; 2007 Jul; 8():238. PubMed ID: 17608956
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Antigenic Peptide Prediction From E6 and E7 Oncoproteins of HPV Types 16 and 18 for Therapeutic Vaccine Design Using Immunoinformatics and MD Simulation Analysis.
    Jabbar B; Rafique S; Salo-Ahen OMH; Ali A; Munir M; Idrees M; Mirza MU; Vanmeert M; Shah SZ; Jabbar I; Rana MA
    Front Immunol; 2018; 9():3000. PubMed ID: 30619353
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Determination of a Predictive Cleavage Motif for Eluted Major Histocompatibility Complex Class II Ligands.
    Paul S; Karosiene E; Dhanda SK; Jurtz V; Edwards L; Nielsen M; Sette A; Peters B
    Front Immunol; 2018; 9():1795. PubMed ID: 30127785
    [TBL] [Abstract][Full Text] [Related]  

  • 14. A pattern search method for putative anchor residues in T cell epitopes.
    Hobohm U; Meyerhans A
    Eur J Immunol; 1993 Jun; 23(6):1271-6. PubMed ID: 7684684
    [TBL] [Abstract][Full Text] [Related]  

  • 15. PREDIVAC: CD4+ T-cell epitope prediction for vaccine design that covers 95% of HLA class II DR protein diversity.
    Oyarzún P; Ellis JJ; Bodén M; Kobe B
    BMC Bioinformatics; 2013 Feb; 14():52. PubMed ID: 23409948
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Steric recognition of T-cell receptor contact residues is required to map mutant epitopes by immunoinformatical programmes.
    Hsu SC; Chang CP; Tsai CY; Hsieh SH; Wu-Hsieh BA; Lo YS; Yang JM
    Immunology; 2012 Jun; 136(2):139-52. PubMed ID: 22121944
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Mooring Stone-Like Arg
    Yue C; Xiang W; Huang X; Sun Y; Xiao J; Liu K; Sun Z; Qiao P; Li H; Gan J; Ba L; Chai Y; Qi J; Liu P; Qi P; Zhao Y; Li Y; Qiu HJ; Gao GF; Gao G; Liu WJ
    J Virol; 2022 Feb; 96(4):e0137821. PubMed ID: 34851145
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Class I MHC-peptide interactions: structural requirements and functional implications.
    Grey HM; Ruppert J; Vitiello A; Sidney J; Kast WM; Kubo RT; Sette A
    Cancer Surv; 1995; 22():37-49. PubMed ID: 7536628
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Immunoinformatics and MD-simulation data suggest that Omicron spike epitopes are more interacting to IgG via better MHC recognition than Delta variant.
    Sarkar A; Santra D; Sundar Panja A; Maiti S
    Int Immunopharmacol; 2023 Oct; 123():110636. PubMed ID: 37499394
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Toward the atomistic simulation of T cell epitopes automated construction of MHC: peptide structures for free energy calculations.
    Todman SJ; Halling-Brown MD; Davies MN; Flower DR; Kayikci M; Moss DS
    J Mol Graph Model; 2008 Feb; 26(6):957-61. PubMed ID: 17766153
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.