150 related articles for article (PubMed ID: 38350858)
1. 123VCF: an intuitive and efficient tool for filtering VCF files.
Eidi M; Abdolalizadeh S; Moeini S; Garshasbi M; Zahiri J
BMC Bioinformatics; 2024 Feb; 25(1):68. PubMed ID: 38350858
[TBL] [Abstract][Full Text] [Related]
2. VCF-Server: A web-based visualization tool for high-throughput variant data mining and management.
Jiang J; Gu J; Zhao T; Lu H
Mol Genet Genomic Med; 2019 Jul; 7(7):e00641. PubMed ID: 31127704
[TBL] [Abstract][Full Text] [Related]
3. VCF.Filter: interactive prioritization of disease-linked genetic variants from sequencing data.
Müller H; Jimenez-Heredia R; Krolo A; Hirschmugl T; Dmytrus J; Boztug K; Bock C
Nucleic Acids Res; 2017 Jul; 45(W1):W567-W572. PubMed ID: 28520890
[TBL] [Abstract][Full Text] [Related]
4. VCF-Miner: GUI-based application for mining variants and annotations stored in VCF files.
Hart SN; Duffy P; Quest DJ; Hossain A; Meiners MA; Kocher JP
Brief Bioinform; 2016 Mar; 17(2):346-51. PubMed ID: 26210358
[TBL] [Abstract][Full Text] [Related]
5. BrowseVCF: a web-based application and workflow to quickly prioritize disease-causative variants in VCF files.
Salatino S; Ramraj V
Brief Bioinform; 2017 Sep; 18(5):774-779. PubMed ID: 27373737
[TBL] [Abstract][Full Text] [Related]
6. VCF-Explorer: filtering and analysing whole genome VCF files.
Akgün M; Demirci H
Bioinformatics; 2017 Nov; 33(21):3468-3470. PubMed ID: 29036499
[TBL] [Abstract][Full Text] [Related]
7. FiNGS: high quality somatic mutations using filters for next generation sequencing.
Wardell CP; Ashby C; Bauer MA
BMC Bioinformatics; 2021 Feb; 22(1):77. PubMed ID: 33602113
[TBL] [Abstract][Full Text] [Related]
8. DaMold: A data-mining platform for variant annotation and visualization in molecular diagnostics research.
Pandey RV; Pabinger S; Kriegner A; Weinhäusel A
Hum Mutat; 2017 Jul; 38(7):778-787. PubMed ID: 28397319
[TBL] [Abstract][Full Text] [Related]
9. AMLVaran: a software approach to implement variant analysis of targeted NGS sequencing data in an oncological care setting.
Wünsch C; Banck H; Müller-Tidow C; Dugas M
BMC Med Genomics; 2020 Feb; 13(1):17. PubMed ID: 32019565
[TBL] [Abstract][Full Text] [Related]
10. NGSpop: A desktop software that supports population studies by identifying sequence variations from next-generation sequencing data.
Lee DJ; Kwon T; Lee HJ; Oh YH; Kim JH; Lee TH
PLoS One; 2022; 17(11):e0260908. PubMed ID: 36395265
[TBL] [Abstract][Full Text] [Related]
11. WEP: a high-performance analysis pipeline for whole-exome data.
D'Antonio M; D'Onorio De Meo P; Paoletti D; Elmi B; Pallocca M; Sanna N; Picardi E; Pesole G; Castrignanò T
BMC Bioinformatics; 2013; 14 Suppl 7(Suppl 7):S11. PubMed ID: 23815231
[TBL] [Abstract][Full Text] [Related]
12. VariantscanR: an R-package as a clinical tool for variant filtering of known phenotype-associated variants in domestic animals.
Boeykens F; Bhatti SFM; Peelman L; Broeckx BJG
BMC Bioinformatics; 2023 Aug; 24(1):305. PubMed ID: 37528412
[TBL] [Abstract][Full Text] [Related]
13. VariFAST: a variant filter by automated scoring based on tagged-signatures.
Zhang H; Wang K; Zhou J; Chen J; Xu Y; Wang D; Li X; Sun R; Zhang M; Wang Z; Shi Y
BMC Bioinformatics; 2019 Dec; 20(Suppl 22):713. PubMed ID: 31888441
[TBL] [Abstract][Full Text] [Related]
14. Var2GO: a web-based tool for gene variants selection.
Granata I; Sangiovanni M; Maiorano F; Miele M; Guarracino MR
BMC Bioinformatics; 2016 Nov; 17(Suppl 12):376. PubMed ID: 28185576
[TBL] [Abstract][Full Text] [Related]
15. Variant Tool Chest: an improved tool to analyze and manipulate variant call format (VCF) files.
Ebbert MT; Wadsworth ME; Boehme KL; Hoyt KL; Sharp AR; O'Fallon BD; Kauwe JS; Ridge PG
BMC Bioinformatics; 2014; 15 Suppl 7(Suppl 7):S12. PubMed ID: 25080132
[TBL] [Abstract][Full Text] [Related]
16. OVarFlow: a resource optimized GATK 4 based Open source Variant calling workFlow.
Bathke J; Lühken G
BMC Bioinformatics; 2021 Aug; 22(1):402. PubMed ID: 34388963
[TBL] [Abstract][Full Text] [Related]
17. CompoundHetVIP: Compound Heterozygous Variant Identification Pipeline.
Miller DB; Piccolo SR
F1000Res; 2020; 9():1211. PubMed ID: 33680433
[TBL] [Abstract][Full Text] [Related]
18. FMFilter: A fast model based variant filtering tool.
Akgün M; Faruk Gerdan Ö; Görmez Z; Demirci H
J Biomed Inform; 2016 Apr; 60():319-27. PubMed ID: 26925517
[TBL] [Abstract][Full Text] [Related]
19. SNVerGUI: a desktop tool for variant analysis of next-generation sequencing data.
Wang W; Hu W; Hou F; Hu P; Wei Z
J Med Genet; 2012 Dec; 49(12):753-5. PubMed ID: 23024288
[TBL] [Abstract][Full Text] [Related]
20. Variant Call Format-Diagnostic Annotation and Reporting Tool: A Customizable Analysis Pipeline for Identification of Clinically Relevant Genetic Variants in Next-Generation Sequencing Data.
Benton MC; Smith RA; Haupt LM; Sutherland HG; Dunn PJ; Albury CL; Maksemous N; Lea R; Griffiths L
J Mol Diagn; 2019 Nov; 21(6):951-960. PubMed ID: 31442673
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]