These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

151 related articles for article (PubMed ID: 38352454)

  • 1. Reference-free Structural Variant Detection in Microbiomes via Long-read Coassembly Graphs.
    Curry KD; Yu FB; Vance SE; Segarra S; Bhaya D; Chikhi R; Rocha EPC; Treangen TJ
    bioRxiv; 2024 Jan; ():. PubMed ID: 38352454
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Reference-free structural variant detection in microbiomes via long-read co-assembly graphs.
    Curry KD; Yu FB; Vance SE; Segarra S; Bhaya D; Chikhi R; Rocha EPC; Treangen TJ
    Bioinformatics; 2024 Jun; 40(Suppl 1):i58-i67. PubMed ID: 38940156
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Evaluating
    Vosloo S; Huo L; Anderson CL; Dai Z; Sevillano M; Pinto A
    Microbiol Spectr; 2021 Dec; 9(3):e0143421. PubMed ID: 34730411
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Terabase-Scale Coassembly of a Tropical Soil Microbiome.
    Riley R; Bowers RM; Camargo AP; Campbell A; Egan R; Eloe-Fadrosh EA; Foster B; Hofmeyr S; Huntemann M; Kellom M; Kimbrel JA; Oliker L; Yelick K; Pett-Ridge J; Salamov A; Varghese NJ; Clum A
    Microbiol Spectr; 2023 Aug; 11(4):e0020023. PubMed ID: 37310219
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Long-Read Sequencing Improves Recovery of Picoeukaryotic Genomes and Zooplankton Marker Genes from Marine Metagenomes.
    Patin NV; Goodwin KD
    mSystems; 2022 Dec; 7(6):e0059522. PubMed ID: 36448813
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Long-read metagenomics retrieves complete single-contig bacterial genomes from canine feces.
    Cuscó A; Pérez D; Viñes J; Fàbregas N; Francino O
    BMC Genomics; 2021 May; 22(1):330. PubMed ID: 33957869
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Improved Assembly of Metagenome-Assembled Genomes and Viruses in Tibetan Saline Lake Sediment by HiFi Metagenomic Sequencing.
    Tao Y; Xun F; Zhao C; Mao Z; Li B; Xing P; Wu QL
    Microbiol Spectr; 2023 Feb; 11(1):e0332822. PubMed ID: 36475839
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Long-Read-Resolved, Ecosystem-Wide Exploration of Nucleotide and Structural Microdiversity of Lake Bacterioplankton Genomes.
    Okazaki Y; Nakano SI; Toyoda A; Tamaki H
    mSystems; 2022 Aug; 7(4):e0043322. PubMed ID: 35938717
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Nanopore long-read-only metagenomics enables complete and high-quality genome reconstruction from mock and complex metagenomes.
    Liu L; Yang Y; Deng Y; Zhang T
    Microbiome; 2022 Dec; 10(1):209. PubMed ID: 36457010
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Performance Characteristics of Next-Generation Sequencing for the Detection of Antimicrobial Resistance Determinants in Escherichia coli Genomes and Metagenomes.
    Rooney AM; Raphenya AR; Melano RG; Seah C; Yee NR; MacFadden DR; McArthur AG; Schneeberger PHH; Coburn B
    mSystems; 2022 Jun; 7(3):e0002222. PubMed ID: 35642524
    [TBL] [Abstract][Full Text] [Related]  

  • 11. MetaSVs: A pipeline combining long and short reads for analysis and visualization of structural variants in metagenomes.
    Li Y; Cao J; Wang J
    Imeta; 2023 Nov; 2(4):e139. PubMed ID: 38868213
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Human reference gut microbiome catalog including newly assembled genomes from under-represented Asian metagenomes.
    Kim CY; Lee M; Yang S; Kim K; Yong D; Kim HR; Lee I
    Genome Med; 2021 Aug; 13(1):134. PubMed ID: 34446072
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Long-Read Metagenome-Assembled Genomes Improve Identification of Novel Complete Biosynthetic Gene Clusters in a Complex Microbial Activated Sludge Ecosystem.
    Sánchez-Navarro R; Nuhamunada M; Mohite OS; Wasmund K; Albertsen M; Gram L; Nielsen PH; Weber T; Singleton CM
    mSystems; 2022 Dec; 7(6):e0063222. PubMed ID: 36445112
    [TBL] [Abstract][Full Text] [Related]  

  • 14. MAGNETO: An Automated Workflow for Genome-Resolved Metagenomics.
    Churcheward B; Millet M; Bihouée A; Fertin G; Chaffron S
    mSystems; 2022 Aug; 7(4):e0043222. PubMed ID: 35703559
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Strain-resolved microbiome sequencing reveals mobile elements that drive bacterial competition on a clinical timescale.
    Zlitni S; Bishara A; Moss EL; Tkachenko E; Kang JB; Culver RN; Andermann TM; Weng Z; Wood C; Handy C; Ji HP; Batzoglou S; Bhatt AS
    Genome Med; 2020 May; 12(1):50. PubMed ID: 32471482
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Comparing genomes recovered from time-series metagenomes using long- and short-read sequencing technologies.
    Orellana LH; Krüger K; Sidhu C; Amann R
    Microbiome; 2023 May; 11(1):105. PubMed ID: 37179340
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Detecting horizontal gene transfer with metagenomics co-barcoding sequencing.
    Han K; Li J; Yang D; Zhuang Q; Zeng H; Rong C; Yue J; Li N; Gu C; Chen L; Chen C
    Microbiol Spectr; 2024 Mar; 12(3):e0360223. PubMed ID: 38315121
    [TBL] [Abstract][Full Text] [Related]  

  • 18. The Reliability of Metagenome-Assembled Genomes (MAGs) in Representing Natural Populations: Insights from Comparing MAGs against Isolate Genomes Derived from the Same Fecal Sample.
    Meziti A; Rodriguez-R LM; Hatt JK; Peña-Gonzalez A; Levy K; Konstantinidis KT
    Appl Environ Microbiol; 2021 Feb; 87(6):. PubMed ID: 33452027
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Large-Scale Metagenome Assembly Reveals Novel Animal-Associated Microbial Genomes, Biosynthetic Gene Clusters, and Other Genetic Diversity.
    Youngblut ND; de la Cuesta-Zuluaga J; Reischer GH; Dauser S; Schuster N; Walzer C; Stalder G; Farnleitner AH; Ley RE
    mSystems; 2020 Nov; 5(6):. PubMed ID: 33144315
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Comprehensive Functional Annotation of Metagenomes and Microbial Genomes Using a Deep Learning-Based Method.
    Maranga M; Szczerbiak P; Bezshapkin V; Gligorijevic V; Chandler C; Bonneau R; Xavier RJ; Vatanen T; Kosciolek T
    mSystems; 2023 Apr; 8(2):e0117822. PubMed ID: 37010293
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.