These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

114 related articles for article (PubMed ID: 38370777)

  • 21. CrossMap: a versatile tool for coordinate conversion between genome assemblies.
    Zhao H; Sun Z; Wang J; Huang H; Kocher JP; Wang L
    Bioinformatics; 2014 Apr; 30(7):1006-7. PubMed ID: 24351709
    [TBL] [Abstract][Full Text] [Related]  

  • 22. A Python library for FAIRer access and deposition to the Metabolomics Workbench Data Repository.
    Smelter A; Moseley HNB
    Metabolomics; 2018; 14(5):64. PubMed ID: 29706851
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Epiviz File Server: Query, transform and interactively explore data from indexed genomic files.
    Kancherla J; Yang Y; Chae H; Corrada Bravo H
    Bioinformatics; 2020 Sep; 36(18):4682-4690. PubMed ID: 32618995
    [TBL] [Abstract][Full Text] [Related]  

  • 24. SamQL: a structured query language and filtering tool for the SAM/BAM file format.
    Lee CT; Maragkakis M
    BMC Bioinformatics; 2021 Oct; 22(1):474. PubMed ID: 34600480
    [TBL] [Abstract][Full Text] [Related]  

  • 25. psims - A Declarative Writer for mzML and mzIdentML for Python.
    Klein J; Zaia J
    Mol Cell Proteomics; 2019 Mar; 18(3):571-575. PubMed ID: 30563850
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Nmrglue: an open source Python package for the analysis of multidimensional NMR data.
    Helmus JJ; Jaroniec CP
    J Biomol NMR; 2013 Apr; 55(4):355-67. PubMed ID: 23456039
    [TBL] [Abstract][Full Text] [Related]  

  • 27. IOData: A python library for reading, writing, and converting computational chemistry file formats and generating input files.
    Verstraelen T; Adams W; Pujal L; Tehrani A; Kelly BD; Macaya L; Meng F; Richer M; Hernández-Esparza R; Yang XD; Chan M; Kim TD; Cools-Ceuppens M; Chuiko V; Vöhringer-Martinez E; Ayers PW; Heidar-Zadeh F
    J Comput Chem; 2021 Mar; 42(6):458-464. PubMed ID: 33368350
    [TBL] [Abstract][Full Text] [Related]  

  • 28. A fast machine learning dataloader for epigenetic tracks from BigWig files.
    Retel JS; Poehlmann A; Chiou J; Steffen A; Clevert DA
    Bioinformatics; 2024 Jan; 40(1):. PubMed ID: 38175786
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Megadepth: efficient coverage quantification for BigWigs and BAMs.
    Wilks C; Ahmed O; Baker DN; Zhang D; Collado-Torres L; Langmead B
    Bioinformatics; 2021 Sep; 37(18):3014-3016. PubMed ID: 33693500
    [TBL] [Abstract][Full Text] [Related]  

  • 30. GSEApy: a comprehensive package for performing gene set enrichment analysis in Python.
    Fang Z; Liu X; Peltz G
    Bioinformatics; 2023 Jan; 39(1):. PubMed ID: 36426870
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Pyfastx: a robust Python package for fast random access to sequences from plain and gzipped FASTA/Q files.
    Du L; Liu Q; Fan Z; Tang J; Zhang X; Price M; Yue B; Zhao K
    Brief Bioinform; 2021 Jul; 22(4):. PubMed ID: 33341884
    [TBL] [Abstract][Full Text] [Related]  

  • 32. WSIC: a Python package and command-line interface for fast whole slide image conversion.
    Pocock J; Raza SEA; Minhas F; Rajpoot N
    Bioinform Adv; 2023; 3(1):vbad122. PubMed ID: 37720007
    [TBL] [Abstract][Full Text] [Related]  

  • 33. bwtool: a tool for bigWig files.
    Pohl A; Beato M
    Bioinformatics; 2014 Jun; 30(11):1618-9. PubMed ID: 24489365
    [TBL] [Abstract][Full Text] [Related]  

  • 34. psm_utils: A High-Level Python API for Parsing and Handling Peptide-Spectrum Matches and Proteomics Search Results.
    Gabriels R; Declercq A; Bouwmeester R; Degroeve S; Martens L
    J Proteome Res; 2023 Feb; 22(2):557-560. PubMed ID: 36508242
    [TBL] [Abstract][Full Text] [Related]  

  • 35. ASCIIGenome: a command line genome browser for console terminals.
    Beraldi D
    Bioinformatics; 2017 May; 33(10):1568-1569. PubMed ID: 28119307
    [TBL] [Abstract][Full Text] [Related]  

  • 36. fluff: exploratory analysis and visualization of high-throughput sequencing data.
    Georgiou G; van Heeringen SJ
    PeerJ; 2016; 4():e2209. PubMed ID: 27547532
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Efficient population-scale variant analysis and prioritization with VAPr.
    Birmingham A; Mark AM; Mazzaferro C; Xu G; Fisch KM
    Bioinformatics; 2018 Aug; 34(16):2843-2845. PubMed ID: 29659724
    [TBL] [Abstract][Full Text] [Related]  

  • 38. SimService: a lightweight library for building simulation services in Python.
    Sego TJ
    Bioinformatics; 2024 Jan; 40(1):. PubMed ID: 38237907
    [TBL] [Abstract][Full Text] [Related]  

  • 39. SpliceWiz: interactive analysis and visualization of alternative splicing in R.
    Wong ACH; Wong JJ; Rasko JEJ; Schmitz U
    Brief Bioinform; 2023 Nov; 25(1):. PubMed ID: 38152981
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Rust-Bio: a fast and safe bioinformatics library.
    Köster J
    Bioinformatics; 2016 Feb; 32(3):444-6. PubMed ID: 26446134
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 6.