197 related articles for article (PubMed ID: 38370977)
21. Spatially aware dimension reduction for spatial transcriptomics.
Shang L; Zhou X
Nat Commun; 2022 Nov; 13(1):7203. PubMed ID: 36418351
[TBL] [Abstract][Full Text] [Related]
22. Region-specific denoising identifies spatial co-expression patterns and intra-tissue heterogeneity in spatially resolved transcriptomics data.
Wang L; Maletic-Savatic M; Liu Z
Nat Commun; 2022 Nov; 13(1):6912. PubMed ID: 36376296
[TBL] [Abstract][Full Text] [Related]
23. Navigating the landscapes of spatial transcriptomics: How computational methods guide the way.
Li R; Chen X; Yang X
Wiley Interdiscip Rev RNA; 2024; 15(2):e1839. PubMed ID: 38527900
[TBL] [Abstract][Full Text] [Related]
24. Probabilistic embedding, clustering, and alignment for integrating spatial transcriptomics data with PRECAST.
Liu W; Liao X; Luo Z; Yang Y; Lau MC; Jiao Y; Shi X; Zhai W; Ji H; Yeong J; Liu J
Nat Commun; 2023 Jan; 14(1):296. PubMed ID: 36653349
[TBL] [Abstract][Full Text] [Related]
25. Identifying spatial domains of spatially resolved transcriptomics via multi-view graph convolutional networks.
Shi X; Zhu J; Long Y; Liang C
Brief Bioinform; 2023 Sep; 24(5):. PubMed ID: 37544658
[TBL] [Abstract][Full Text] [Related]
26. Computational elucidation of spatial gene expression variation from spatially resolved transcriptomics data.
Li K; Yan C; Li C; Chen L; Zhao J; Zhang Z; Bao S; Sun J; Zhou M
Mol Ther Nucleic Acids; 2022 Mar; 27():404-411. PubMed ID: 35036053
[TBL] [Abstract][Full Text] [Related]
27. Spatially contrastive variational autoencoder for deciphering tissue heterogeneity from spatially resolved transcriptomics.
Hu Y; Xiao K; Yang H; Liu X; Zhang C; Shi Q
Brief Bioinform; 2024 Jan; 25(2):. PubMed ID: 38324623
[TBL] [Abstract][Full Text] [Related]
28. Characterizing spatial gene expression heterogeneity in spatially resolved single-cell transcriptomic data with nonuniform cellular densities.
Miller BF; Bambah-Mukku D; Dulac C; Zhuang X; Fan J
Genome Res; 2021 Oct; 31(10):1843-1855. PubMed ID: 34035045
[TBL] [Abstract][Full Text] [Related]
29. SMASH: Scalable Method for Analyzing Spatial Heterogeneity of genes in spatial transcriptomics data.
Seal S; Bitler BG; Ghosh D
PLoS Genet; 2023 Oct; 19(10):e1010983. PubMed ID: 37862362
[TBL] [Abstract][Full Text] [Related]
30. STAMarker: determining spatial domain-specific variable genes with saliency maps in deep learning.
Zhang C; Dong K; Aihara K; Chen L; Zhang S
Nucleic Acids Res; 2023 Nov; 51(20):e103. PubMed ID: 37811885
[TBL] [Abstract][Full Text] [Related]
31. Statistical and machine learning methods for spatially resolved transcriptomics with histology.
Hu J; Schroeder A; Coleman K; Chen C; Auerbach BJ; Li M
Comput Struct Biotechnol J; 2021; 19():3829-3841. PubMed ID: 34285782
[TBL] [Abstract][Full Text] [Related]
32. stAPAminer: Mining Spatial Patterns of Alternative Polyadenylation for Spatially Resolved Transcriptomic Studies.
Ji G; Tang Q; Zhu S; Zhu J; Ye P; Xia S; Wu X
Genomics Proteomics Bioinformatics; 2023 Jun; 21(3):601-618. PubMed ID: 36669641
[TBL] [Abstract][Full Text] [Related]
33. Spatial-ID: a cell typing method for spatially resolved transcriptomics via transfer learning and spatial embedding.
Shen R; Liu L; Wu Z; Zhang Y; Yuan Z; Guo J; Yang F; Zhang C; Chen B; Feng W; Liu C; Guo J; Fan G; Zhang Y; Li Y; Xu X; Yao J
Nat Commun; 2022 Dec; 13(1):7640. PubMed ID: 36496406
[TBL] [Abstract][Full Text] [Related]
34. Bioinformatics approach to spatially resolved transcriptomics.
Krešimir Lukić I
Emerg Top Life Sci; 2021 Nov; 5(5):669-674. PubMed ID: 34369559
[TBL] [Abstract][Full Text] [Related]
35. Knowledge-graph-based cell-cell communication inference for spatially resolved transcriptomic data with SpaTalk.
Shao X; Li C; Yang H; Lu X; Liao J; Qian J; Wang K; Cheng J; Yang P; Chen H; Xu X; Fan X
Nat Commun; 2022 Jul; 13(1):4429. PubMed ID: 35908020
[TBL] [Abstract][Full Text] [Related]
36. Novel insights from spatial transcriptome analysis in solid tumors.
Du J; An ZJ; Huang ZF; Yang YC; Zhang MH; Fu XH; Shi WY; Hou J
Int J Biol Sci; 2023; 19(15):4778-4792. PubMed ID: 37781515
[TBL] [Abstract][Full Text] [Related]
37. Spatial Transcriptomics: Emerging Technologies in Tissue Gene Expression Profiling.
Robles-Remacho A; Sanchez-Martin RM; Diaz-Mochon JJ
Anal Chem; 2023 Oct; 95(42):15450-15460. PubMed ID: 37814884
[TBL] [Abstract][Full Text] [Related]
38. Spatial transcriptomics in human skin research.
Tekkela S; Theocharidis G; McGrath JA; Onoufriadis A
Exp Dermatol; 2023 Jun; 32(6):731-739. PubMed ID: 37150587
[TBL] [Abstract][Full Text] [Related]
39. Space: the final frontier - achieving single-cell, spatially resolved transcriptomics in plants.
Gurazada SGR; Cox KL; Czymmek KJ; Meyers BC
Emerg Top Life Sci; 2021 May; 5(2):179-188. PubMed ID: 33522561
[TBL] [Abstract][Full Text] [Related]
40. Spatially Resolved Transcriptomes-Next Generation Tools for Tissue Exploration.
Asp M; Bergenstråhle J; Lundeberg J
Bioessays; 2020 Oct; 42(10):e1900221. PubMed ID: 32363691
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]