BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

160 related articles for article (PubMed ID: 38487693)

  • 21. The COMBAT-TB Workbench: Making Powerful Mycobacterium tuberculosis Bioinformatics Accessible.
    van Heusden P; Mashologu Z; Lose T; Warren R; Christoffels A
    mSphere; 2022 Feb; 7(1):e0099121. PubMed ID: 35138128
    [TBL] [Abstract][Full Text] [Related]  

  • 22. SPREAD: A Fully Automated Toolkit for Single-Particle Cryogenic Electron Microscopy Data 3D Reconstruction with Image-Network-Aided Orientation Assignment.
    Xie R; Chen YX; Cai JM; Yang Y; Shen HB
    J Chem Inf Model; 2020 May; 60(5):2614-2625. PubMed ID: 31990536
    [TBL] [Abstract][Full Text] [Related]  

  • 23. SPIM workflow manager for HPC.
    Kožusznik J; Bainar P; Klímová J; Krumnikl M; Moravec P; Svatoň V; Tomančák P
    Bioinformatics; 2019 Oct; 35(19):3875-3876. PubMed ID: 30799494
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Live Analysis and Reconstruction of Single-Particle Cryo-Electron Microscopy Data with CryoFLARE.
    Schenk AD; Cavadini S; Thomä NH; Genoud C
    J Chem Inf Model; 2020 May; 60(5):2561-2569. PubMed ID: 32233514
    [TBL] [Abstract][Full Text] [Related]  

  • 25. SLIM: a flexible web application for the reproducible processing of environmental DNA metabarcoding data.
    Dufresne Y; Lejzerowicz F; Perret-Gentil LA; Pawlowski J; Cordier T
    BMC Bioinformatics; 2019 Feb; 20(1):88. PubMed ID: 30782112
    [TBL] [Abstract][Full Text] [Related]  

  • 26. PipeVal: light-weight extensible tool for file validation.
    Patel Y; Beshlikyan A; Jordan M; Kim G; Holmes A; Yamaguchi TN; Boutros PC
    Bioinformatics; 2024 Feb; 40(2):. PubMed ID: 38341658
    [TBL] [Abstract][Full Text] [Related]  

  • 27. The TimeStudio Project: An open source scientific workflow system for the behavioral and brain sciences.
    Nyström P; Falck-Ytter T; Gredebäck G
    Behav Res Methods; 2016 Jun; 48(2):542-52. PubMed ID: 26170051
    [TBL] [Abstract][Full Text] [Related]  

  • 28. An automated workflow for parallel processing of large multiview SPIM recordings.
    Schmied C; Steinbach P; Pietzsch T; Preibisch S; Tomancak P
    Bioinformatics; 2016 Apr; 32(7):1112-4. PubMed ID: 26628585
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Efficient 3D-CTF correction for cryo-electron tomography using NovaCTF improves subtomogram averaging resolution to 3.4Å.
    Turoňová B; Schur FKM; Wan W; Briggs JAG
    J Struct Biol; 2017 Sep; 199(3):187-195. PubMed ID: 28743638
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Single particle analysis integrated with microscopy: a high-throughput approach for reconstructing icosahedral particles.
    Yan X; Cardone G; Zhang X; Zhou ZH; Baker TS
    J Struct Biol; 2014 Apr; 186(1):8-18. PubMed ID: 24613762
    [TBL] [Abstract][Full Text] [Related]  

  • 31. NeuroPycon: An open-source python toolbox for fast multi-modal and reproducible brain connectivity pipelines.
    Meunier D; Pascarella A; Altukhov D; Jas M; Combrisson E; Lajnef T; Bertrand-Dubois D; Hadid V; Alamian G; Alves J; Barlaam F; Saive AL; Dehgan A; Jerbi K
    Neuroimage; 2020 Oct; 219():117020. PubMed ID: 32522662
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Automatic post-picking using MAPPOS improves particle image detection from cryo-EM micrographs.
    Norousi R; Wickles S; Leidig C; Becker T; Schmid VJ; Beckmann R; Tresch A
    J Struct Biol; 2013 May; 182(2):59-66. PubMed ID: 23454482
    [TBL] [Abstract][Full Text] [Related]  

  • 33. EPiK-a Workflow for Electron Tomography in Kepler.
    Chen R; Wan X; Altintas I; Wang J; Crawl D; Phan S; Lawrence A; Ellisman M
    Procedia Comput Sci; 2014; 20():2295-2305. PubMed ID: 25621086
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Subtomogram averaging from cryo-electron tomograms.
    Leigh KE; Navarro PP; Scaramuzza S; Chen W; Zhang Y; Castaño-Díez D; Kudryashev M
    Methods Cell Biol; 2019; 152():217-259. PubMed ID: 31326022
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Tourmaline: A containerized workflow for rapid and iterable amplicon sequence analysis using QIIME 2 and Snakemake.
    Thompson LR; Anderson SR; Den Uyl PA; Patin NV; Lim SJ; Sanderson G; Goodwin KD
    Gigascience; 2022 Jul; 11():. PubMed ID: 35902092
    [TBL] [Abstract][Full Text] [Related]  

  • 36. SwarmPS: rapid, semi-automated single particle selection software.
    Woolford D; Ericksson G; Rothnagel R; Muller D; Landsberg MJ; Pantelic RS; McDowall A; Pailthorpe B; Young PR; Hankamer B; Banks J
    J Struct Biol; 2007 Jan; 157(1):174-88. PubMed ID: 16774837
    [TBL] [Abstract][Full Text] [Related]  

  • 37.
    Grant T; Rohou A; Grigorieff N
    Elife; 2018 Mar; 7():. PubMed ID: 29513216
    [TBL] [Abstract][Full Text] [Related]  

  • 38. FPM app: an open-source MATLAB application for simple and intuitive Fourier ptychographic reconstruction.
    Rogalski M; Zdańkowski P; Trusiak M
    Bioinformatics; 2021 Oct; 37(20):3695-3696. PubMed ID: 33830197
    [TBL] [Abstract][Full Text] [Related]  

  • 39. TOMOMAN: a software package for large scale cryo-electron tomography data preprocessing, community data sharing, and collaborative computing.
    Khavnekar S; Wan W
    bioRxiv; 2024 May; ():. PubMed ID: 38746401
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Flexible workflows for on-the-fly electron-microscopy single-particle image processing using Scipion.
    Maluenda D; Majtner T; Horvath P; Vilas JL; Jiménez-Moreno A; Mota J; Ramírez-Aportela E; Sánchez-García R; Conesa P; Del Caño L; Rancel Y; Fonseca Y; Martínez M; Sharov G; García CA; Strelak D; Melero R; Marabini R; Carazo JM; Sorzano COS
    Acta Crystallogr D Struct Biol; 2019 Oct; 75(Pt 10):882-894. PubMed ID: 31588920
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 8.