182 related articles for article (PubMed ID: 38507691)
1. Contrastive pre-training and 3D convolution neural network for RNA and small molecule binding affinity prediction.
Sun S; Gao L
Bioinformatics; 2024 Mar; 40(4):. PubMed ID: 38507691
[TBL] [Abstract][Full Text] [Related]
2. RLBind: a deep learning method to predict RNA-ligand binding sites.
Wang K; Zhou R; Wu Y; Li M
Brief Bioinform; 2023 Jan; 24(1):. PubMed ID: 36398911
[TBL] [Abstract][Full Text] [Related]
3. BACPI: a bi-directional attention neural network for compound-protein interaction and binding affinity prediction.
Li M; Lu Z; Wu Y; Li Y
Bioinformatics; 2022 Mar; 38(7):1995-2002. PubMed ID: 35043942
[TBL] [Abstract][Full Text] [Related]
4. A New Hybrid Neural Network Deep Learning Method for Protein-Ligand Binding Affinity Prediction and De Novo Drug Design.
Limbu S; Dakshanamurthy S
Int J Mol Sci; 2022 Nov; 23(22):. PubMed ID: 36430386
[TBL] [Abstract][Full Text] [Related]
5. GeneralizedDTA: combining pre-training and multi-task learning to predict drug-target binding affinity for unknown drug discovery.
Lin S; Shi C; Chen J
BMC Bioinformatics; 2022 Sep; 23(1):367. PubMed ID: 36071406
[TBL] [Abstract][Full Text] [Related]
6. A spatial-temporal gated attention module for molecular property prediction based on molecular geometry.
Li C; Wang J; Niu Z; Yao J; Zeng X
Brief Bioinform; 2021 Sep; 22(5):. PubMed ID: 33822856
[TBL] [Abstract][Full Text] [Related]
7. DeepDTA: deep drug-target binding affinity prediction.
Öztürk H; Özgür A; Ozkirimli E
Bioinformatics; 2018 Sep; 34(17):i821-i829. PubMed ID: 30423097
[TBL] [Abstract][Full Text] [Related]
8. RNA3DCNN: Local and global quality assessments of RNA 3D structures using 3D deep convolutional neural networks.
Li J; Zhu W; Wang J; Li W; Gong S; Zhang J; Wang W
PLoS Comput Biol; 2018 Nov; 14(11):e1006514. PubMed ID: 30481171
[TBL] [Abstract][Full Text] [Related]
9. CMMS-GCL: cross-modality metabolic stability prediction with graph contrastive learning.
Du BX; Long Y; Li X; Wu M; Shi JY
Bioinformatics; 2023 Aug; 39(8):. PubMed ID: 37572298
[TBL] [Abstract][Full Text] [Related]
10. Similarity measures-based graph co-contrastive learning for drug-disease association prediction.
Gao Z; Ma H; Zhang X; Wang Y; Wu Z
Bioinformatics; 2023 Jun; 39(6):. PubMed ID: 37261859
[TBL] [Abstract][Full Text] [Related]
11. Pre-training graph neural networks for link prediction in biomedical networks.
Long Y; Wu M; Liu Y; Fang Y; Kwoh CK; Chen J; Luo J; Li X
Bioinformatics; 2022 Apr; 38(8):2254-2262. PubMed ID: 35171981
[TBL] [Abstract][Full Text] [Related]
12. A deep learning method for drug-target affinity prediction based on sequence interaction information mining.
Jiang M; Shao Y; Zhang Y; Zhou W; Pang S
PeerJ; 2023; 11():e16625. PubMed ID: 38099302
[TBL] [Abstract][Full Text] [Related]
13. MDeePred: novel multi-channel protein featurization for deep learning-based binding affinity prediction in drug discovery.
Rifaioglu AS; Cetin Atalay R; Cansen Kahraman D; Doğan T; Martin M; Atalay V
Bioinformatics; 2021 May; 37(5):693-704. PubMed ID: 33067636
[TBL] [Abstract][Full Text] [Related]
14. Drug-target binding affinity prediction using message passing neural network and self supervised learning.
Xia L; Xu L; Pan S; Niu D; Zhang B; Li Z
BMC Genomics; 2023 Sep; 24(1):557. PubMed ID: 37730555
[TBL] [Abstract][Full Text] [Related]
15. GraphormerDTI: A graph transformer-based approach for drug-target interaction prediction.
Gao M; Zhang D; Chen Y; Zhang Y; Wang Z; Wang X; Li S; Guo Y; Webb GI; Nguyen ATN; May L; Song J
Comput Biol Med; 2024 May; 173():108339. PubMed ID: 38547658
[TBL] [Abstract][Full Text] [Related]
16. CSatDTA: Prediction of Drug-Target Binding Affinity Using Convolution Model with Self-Attention.
Ghimire A; Tayara H; Xuan Z; Chong KT
Int J Mol Sci; 2022 Jul; 23(15):. PubMed ID: 35955587
[TBL] [Abstract][Full Text] [Related]
17. DeepCDA: deep cross-domain compound-protein affinity prediction through LSTM and convolutional neural networks.
Abbasi K; Razzaghi P; Poso A; Amanlou M; Ghasemi JB; Masoudi-Nejad A
Bioinformatics; 2020 Nov; 36(17):4633-4642. PubMed ID: 32462178
[TBL] [Abstract][Full Text] [Related]
18. GraphscoreDTA: optimized graph neural network for protein-ligand binding affinity prediction.
Wang K; Zhou R; Tang J; Li M
Bioinformatics; 2023 Jun; 39(6):. PubMed ID: 37225408
[TBL] [Abstract][Full Text] [Related]
19. OctSurf: Efficient hierarchical voxel-based molecular surface representation for protein-ligand affinity prediction.
Liu Q; Wang PS; Zhu C; Gaines BB; Zhu T; Bi J; Song M
J Mol Graph Model; 2021 Jun; 105():107865. PubMed ID: 33640787
[TBL] [Abstract][Full Text] [Related]
20. Prediction of drug protein interactions based on variable scale characteristic pyramid convolution network.
Chen Y; Zhu Y; Zhang Z; Wang J; Wang C
Methods; 2023 Mar; 211():42-47. PubMed ID: 36804213
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
