147 related articles for article (PubMed ID: 38508742)
1. DiGAlign: Versatile and Interactive Visualization of Sequence Alignment for Comparative Genomics.
Nishimura Y; Yamada K; Okazaki Y; Ogata H
Microbes Environ; 2024; 39(1):. PubMed ID: 38508742
[TBL] [Abstract][Full Text] [Related]
2. GSV: a web-based genome synteny viewer for customized data.
Revanna KV; Chiu CC; Bierschank E; Dong Q
BMC Bioinformatics; 2011 Aug; 12():316. PubMed ID: 21810250
[TBL] [Abstract][Full Text] [Related]
3. Multiple alignment of genomic sequences using CHAOS, DIALIGN and ABC.
Pöhler D; Werner N; Steinkamp R; Morgenstern B
Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W532-4. PubMed ID: 15980528
[TBL] [Abstract][Full Text] [Related]
4. CGAS: comparative genomic analysis server.
Itoh M; Watanabe H
Bioinformatics; 2009 Apr; 25(7):958-9. PubMed ID: 19218352
[TBL] [Abstract][Full Text] [Related]
5. Synteny Portal: a web-based application portal for synteny block analysis.
Lee J; Hong WY; Cho M; Sim M; Lee D; Ko Y; Kim J
Nucleic Acids Res; 2016 Jul; 44(W1):W35-40. PubMed ID: 27154270
[TBL] [Abstract][Full Text] [Related]
6. Visualization of comparative genomic analyses by BLAST score ratio.
Rasko DA; Myers GS; Ravel J
BMC Bioinformatics; 2005 Jan; 6():2. PubMed ID: 15634352
[TBL] [Abstract][Full Text] [Related]
7. A web-based multi-genome synteny viewer for customized data.
Revanna KV; Munro D; Gao A; Chiu CC; Pathak A; Dong Q
BMC Bioinformatics; 2012 Aug; 13():190. PubMed ID: 22856879
[TBL] [Abstract][Full Text] [Related]
8. AutoGRAPH: an interactive web server for automating and visualizing comparative genome maps.
Derrien T; André C; Galibert F; Hitte C
Bioinformatics; 2007 Feb; 23(4):498-9. PubMed ID: 17145741
[TBL] [Abstract][Full Text] [Related]
9. GenomeCons: a web server for manipulating multiple genome sequence alignments and their consensus sequences.
Sato T; Suyama M
Bioinformatics; 2015 Apr; 31(8):1293-5. PubMed ID: 25480378
[TBL] [Abstract][Full Text] [Related]
10. NGSEP 4: Efficient and accurate identification of orthogroups and whole-genome alignment.
Tello D; Gonzalez-Garcia LN; Gomez J; Zuluaga-Monares JC; Garcia R; Angel R; Mahecha D; Duarte E; Leon MDR; Reyes F; Escobar-Velásquez C; Linares-Vásquez M; Cardozo N; Duitama J
Mol Ecol Resour; 2023 Apr; 23(3):712-724. PubMed ID: 36377253
[TBL] [Abstract][Full Text] [Related]
11. ShinySyn: a Shiny/R application for the interactive visualization and integration of macro- and micro-synteny data.
Xiao Z; Lam HM
Bioinformatics; 2022 Sep; 38(18):4406-4408. PubMed ID: 35866686
[TBL] [Abstract][Full Text] [Related]
12. e2g: an interactive web-based server for efficiently mapping large EST and cDNA sets to genomic sequences.
Krüger J; Sczyrba A; Kurtz S; Giegerich R
Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W301-4. PubMed ID: 15215398
[TBL] [Abstract][Full Text] [Related]
13. NGenomeSyn: an easy-to-use and flexible tool for publication-ready visualization of syntenic relationships across multiple genomes.
He W; Yang J; Jing Y; Xu L; Yu K; Fang X
Bioinformatics; 2023 Mar; 39(3):. PubMed ID: 36883694
[TBL] [Abstract][Full Text] [Related]
14. GenomeVISTA--an integrated software package for whole-genome alignment and visualization.
Poliakov A; Foong J; Brudno M; Dubchak I
Bioinformatics; 2014 Sep; 30(18):2654-5. PubMed ID: 24860159
[TBL] [Abstract][Full Text] [Related]
15. GPAC-genome presence/absence compiler: a web application to comparatively visualize multiple genome-level changes.
Noll A; Grundmann N; Churakov G; Brosius J; Makałowski W; Schmitz J
Mol Biol Evol; 2015 Jan; 32(1):275-86. PubMed ID: 25261406
[TBL] [Abstract][Full Text] [Related]
16. MultiPipMaker: comparative alignment server for multiple DNA sequences.
Elnitski L; Riemer C; Burhans R; Hardison R; Miller W
Curr Protoc Bioinformatics; 2005 Apr; Chapter 10():Unit10.4. PubMed ID: 18428743
[TBL] [Abstract][Full Text] [Related]
17. SinicView: a visualization environment for comparisons of multiple nucleotide sequence alignment tools.
Shih AC; Lee DT; Lin L; Peng CL; Chen SH; Wu YW; Wong CY; Chou MY; Shiao TC; Hsieh MF
BMC Bioinformatics; 2006 Mar; 7():103. PubMed ID: 16509994
[TBL] [Abstract][Full Text] [Related]
18. Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research.
Conesa A; Götz S; García-Gómez JM; Terol J; Talón M; Robles M
Bioinformatics; 2005 Sep; 21(18):3674-6. PubMed ID: 16081474
[TBL] [Abstract][Full Text] [Related]
19. ChroKit: a Shiny-based framework for interactive analysis, visualization and integration of genomic data.
Croci O; Campaner S
Nucleic Acids Res; 2023 Jul; 51(W1):W83-W92. PubMed ID: 37144464
[TBL] [Abstract][Full Text] [Related]
20. CloVR-Comparative: automated, cloud-enabled comparative microbial genome sequence analysis pipeline.
Agrawal S; Arze C; Adkins RS; Crabtree J; Riley D; Vangala M; Galens K; Fraser CM; Tettelin H; White O; Angiuoli SV; Mahurkar A; Fricke WF
BMC Genomics; 2017 Apr; 18(1):332. PubMed ID: 28449639
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]