BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

174 related articles for article (PubMed ID: 38514779)

  • 1. RoboEM: automated 3D flight tracing for synaptic-resolution connectomics.
    Schmidt M; Motta A; Sievers M; Helmstaedter M
    Nat Methods; 2024 May; 21(5):908-913. PubMed ID: 38514779
    [TBL] [Abstract][Full Text] [Related]  

  • 2. SynEM, automated synapse detection for connectomics.
    Staffler B; Berning M; Boergens KM; Gour A; Smagt PV; Helmstaedter M
    Elife; 2017 Jul; 6():. PubMed ID: 28708060
    [TBL] [Abstract][Full Text] [Related]  

  • 3. VAST (Volume Annotation and Segmentation Tool): Efficient Manual and Semi-Automatic Labeling of Large 3D Image Stacks.
    Berger DR; Seung HS; Lichtman JW
    Front Neural Circuits; 2018; 12():88. PubMed ID: 30386216
    [TBL] [Abstract][Full Text] [Related]  

  • 4. NeuTu: Software for Collaborative, Large-Scale, Segmentation-Based Connectome Reconstruction.
    Zhao T; Olbris DJ; Yu Y; Plaza SM
    Front Neural Circuits; 2018; 12():101. PubMed ID: 30483068
    [TBL] [Abstract][Full Text] [Related]  

  • 5. webKnossos: efficient online 3D data annotation for connectomics.
    Boergens KM; Berning M; Bocklisch T; Bräunlein D; Drawitsch F; Frohnhofen J; Herold T; Otto P; Rzepka N; Werkmeister T; Werner D; Wiese G; Wissler H; Helmstaedter M
    Nat Methods; 2017 Jul; 14(7):691-694. PubMed ID: 28604722
    [TBL] [Abstract][Full Text] [Related]  

  • 6. SegEM: Efficient Image Analysis for High-Resolution Connectomics.
    Berning M; Boergens KM; Helmstaedter M
    Neuron; 2015 Sep; 87(6):1193-1206. PubMed ID: 26402603
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A modular hierarchical approach to 3D electron microscopy image segmentation.
    Liu T; Jones C; Seyedhosseini M; Tasdizen T
    J Neurosci Methods; 2014 Apr; 226():88-102. PubMed ID: 24491638
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Extracellular space preservation aids the connectomic analysis of neural circuits.
    Pallotto M; Watkins PV; Fubara B; Singer JH; Briggman KL
    Elife; 2015 Dec; 4():. PubMed ID: 26650352
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Deep residual contextual and subpixel convolution network for automated neuronal structure segmentation in micro-connectomics.
    Xiao C; Hong B; Liu J; Tang Y; Xie Q; Han H
    Comput Methods Programs Biomed; 2022 Jun; 219():106759. PubMed ID: 35338886
    [TBL] [Abstract][Full Text] [Related]  

  • 10. mEMbrain: an interactive deep learning MATLAB tool for connectomic segmentation on commodity desktops.
    Pavarino EC; Yang E; Dhanyasi N; Wang MD; Bidel F; Lu X; Yang F; Francisco Park C; Bangalore Renuka M; Drescher B; Samuel ADT; Hochner B; Katz PS; Zhen M; Lichtman JW; Meirovitch Y
    Front Neural Circuits; 2023; 17():952921. PubMed ID: 37396399
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Rapid and Semi-automated Extraction of Neuronal Cell Bodies and Nuclei from Electron Microscopy Image Stacks.
    Holcomb PS; Morehead M; Doretto G; Chen P; Berg S; Plaza S; Spirou G
    Methods Mol Biol; 2016; 1427():277-90. PubMed ID: 27259933
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Large Scale Image Segmentation with Structured Loss Based Deep Learning for Connectome Reconstruction.
    Funke J; Tschopp F; Grisaitis W; Sheridan A; Singh C; Saalfeld S; Turaga SC
    IEEE Trans Pattern Anal Mach Intell; 2019 Jul; 41(7):1669-1680. PubMed ID: 29993708
    [TBL] [Abstract][Full Text] [Related]  

  • 13. DeepEM3D: approaching human-level performance on 3D anisotropic EM image segmentation.
    Zeng T; Wu B; Ji S
    Bioinformatics; 2017 Aug; 33(16):2555-2562. PubMed ID: 28379412
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Analyzing Image Segmentation for Connectomics.
    Plaza SM; Funke J
    Front Neural Circuits; 2018; 12():102. PubMed ID: 30483069
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Neuronal tracing for connectomic studies.
    Lu J
    Neuroinformatics; 2011 Sep; 9(2-3):159-66. PubMed ID: 21340747
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Design and Evaluation of Interactive Proofreading Tools for Connectomics.
    Haehn D; Knowles-Barley S; Roberts M; Beyer J; Kasthuri N; Lichtman JW; Pfister H
    IEEE Trans Vis Comput Graph; 2014 Dec; 20(12):2466-75. PubMed ID: 26356960
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Large-volume en-bloc staining for electron microscopy-based connectomics.
    Hua Y; Laserstein P; Helmstaedter M
    Nat Commun; 2015 Aug; 6():7923. PubMed ID: 26235643
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Recent advancement in the challenges to connectomics.
    Ohno N; Katoh M; Saitoh Y; Saitoh S
    Microscopy (Oxf); 2016 Apr; 65(2):97-107. PubMed ID: 26671942
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Learning context cues for synapse segmentation.
    Becker C; Ali K; Knott G; Fua P
    IEEE Trans Med Imaging; 2013 Oct; 32(10):1864-77. PubMed ID: 23771317
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Neural process reconstruction from sparse user scribbles.
    Roberts M; Jeong WK; Vázquez-Reina A; Unger M; Bischof H; Lichtman J; Pfister H
    Med Image Comput Comput Assist Interv; 2011; 14(Pt 1):621-8. PubMed ID: 22003670
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.