These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

147 related articles for article (PubMed ID: 38521945)

  • 1. Amplidiff: an optimized amplicon sequencing approach to estimating lineage abundances in viral metagenomes.
    Bemmelen JV; Smyth DS; Baaijens JA
    BMC Bioinformatics; 2024 Mar; 25(1):126. PubMed ID: 38521945
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Genome-Based Targeted Sequencing as a Reproducible Microbial Community Profiling Assay.
    Benjamino J; Leopold B; Phillips D; Adams MD
    mSphere; 2021 Apr; 6(2):. PubMed ID: 33827913
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Primer Design for an Accurate View of Picocyanobacterial Community Structure by Using High-Throughput Sequencing.
    Huber P; Cornejo-Castillo FM; Ferrera I; Sánchez P; Logares R; Metz S; Balagué V; Acinas SG; Gasol JM; Unrein F
    Appl Environ Microbiol; 2019 Apr; 85(7):. PubMed ID: 30709827
    [TBL] [Abstract][Full Text] [Related]  

  • 4. A multi-amplicon 16S rRNA sequencing and analysis method for improved taxonomic profiling of bacterial communities.
    Schriefer AE; Cliften PF; Hibberd MC; Sawyer C; Brown-Kennerly V; Burcea L; Klotz E; Crosby SD; Gordon JI; Head RD
    J Microbiol Methods; 2018 Nov; 154():6-13. PubMed ID: 30273610
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Choice of 16S Ribosomal RNA Primers Impacts Male Urinary Microbiota Profiling.
    Heidrich V; Inoue LT; Asprino PF; Bettoni F; Mariotti ACH; Bastos DA; Jardim DLF; Arap MA; Camargo AA
    Front Cell Infect Microbiol; 2022; 12():862338. PubMed ID: 35531325
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Optimisation of methods for bacterial skin microbiome investigation: primer selection and comparison of the 454 versus MiSeq platform.
    Castelino M; Eyre S; Moat J; Fox G; Martin P; Ho P; Upton M; Barton A
    BMC Microbiol; 2017 Jan; 17(1):23. PubMed ID: 28109256
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Primer, Pipelines, Parameters: Issues in 16S rRNA Gene Sequencing.
    Abellan-Schneyder I; Matchado MS; Reitmeier S; Sommer A; Sewald Z; Baumbach J; List M; Neuhaus K
    mSphere; 2021 Feb; 6(1):. PubMed ID: 33627512
    [TBL] [Abstract][Full Text] [Related]  

  • 8. MinION™ nanopore sequencing of environmental metagenomes: a synthetic approach.
    Brown BL; Watson M; Minot SS; Rivera MC; Franklin RB
    Gigascience; 2017 Mar; 6(3):1-10. PubMed ID: 28327976
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Species-level bacterial community profiling of the healthy sinonasal microbiome using Pacific Biosciences sequencing of full-length 16S rRNA genes.
    Earl JP; Adappa ND; Krol J; Bhat AS; Balashov S; Ehrlich RL; Palmer JN; Workman AD; Blasetti M; Sen B; Hammond J; Cohen NA; Ehrlich GD; Mell JC
    Microbiome; 2018 Oct; 6(1):190. PubMed ID: 30352611
    [TBL] [Abstract][Full Text] [Related]  

  • 10. rpoB, a promising marker for analyzing the diversity of bacterial communities by amplicon sequencing.
    Ogier JC; Pagès S; Galan M; Barret M; Gaudriault S
    BMC Microbiol; 2019 Jul; 19(1):171. PubMed ID: 31357928
    [TBL] [Abstract][Full Text] [Related]  

  • 11. High-resolution ISR amplicon sequencing reveals personalized oral microbiome.
    Mukherjee C; Beall CJ; Griffen AL; Leys EJ
    Microbiome; 2018 Sep; 6(1):153. PubMed ID: 30185233
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Metagenomic 16S rDNA Illumina tags are a powerful alternative to amplicon sequencing to explore diversity and structure of microbial communities.
    Logares R; Sunagawa S; Salazar G; Cornejo-Castillo FM; Ferrera I; Sarmento H; Hingamp P; Ogata H; de Vargas C; Lima-Mendez G; Raes J; Poulain J; Jaillon O; Wincker P; Kandels-Lewis S; Karsenti E; Bork P; Acinas SG
    Environ Microbiol; 2014 Sep; 16(9):2659-71. PubMed ID: 24102695
    [TBL] [Abstract][Full Text] [Related]  

  • 13. RiboFR-Seq: a novel approach to linking 16S rRNA amplicon profiles to metagenomes.
    Zhang Y; Ji P; Wang J; Zhao F
    Nucleic Acids Res; 2016 Jun; 44(10):e99. PubMed ID: 26984526
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Combining 16S rRNA gene variable regions enables high-resolution microbial community profiling.
    Fuks G; Elgart M; Amir A; Zeisel A; Turnbaugh PJ; Soen Y; Shental N
    Microbiome; 2018 Jan; 6(1):17. PubMed ID: 29373999
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Absolute quantitation of microbes using 16S rRNA gene metabarcoding: A rapid normalization of relative abundances by quantitative PCR targeting a 16S rRNA gene spike-in standard.
    Zemb O; Achard CS; Hamelin J; De Almeida ML; Gabinaud B; Cauquil L; Verschuren LMG; Godon JJ
    Microbiologyopen; 2020 Mar; 9(3):e977. PubMed ID: 31927795
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Towards Quantitative Microbiome Community Profiling Using Internal Standards.
    Lin Y; Gifford S; Ducklow H; Schofield O; Cassar N
    Appl Environ Microbiol; 2019 Mar; 85(5):. PubMed ID: 30552195
    [TBL] [Abstract][Full Text] [Related]  

  • 17. High-resolution microbiome analysis enabled by linking of 16S rRNA gene sequences with adjacent genomic contexts.
    Kapustina Ž; Medžiūnė J; Alzbutas G; Rokaitis I; Matjošaitis K; Mackevičius G; Žeimytė S; Karpus L; Lubys A
    Microb Genom; 2021 Sep; 7(9):. PubMed ID: 34473015
    [TBL] [Abstract][Full Text] [Related]  

  • 18. MetCap: a bioinformatics probe design pipeline for large-scale targeted metagenomics.
    Kushwaha SK; Manoharan L; Meerupati T; Hedlund K; Ahrén D
    BMC Bioinformatics; 2015 Feb; 16(1):65. PubMed ID: 25880302
    [TBL] [Abstract][Full Text] [Related]  

  • 19. A simple method that enhances minority species detection in the microbiota: 16S metagenome-DRIP (Deeper Resolution using an Inhibitory Primer).
    Nakajima A; Yoshida K; Gotoh A; Katoh T; Ojima MN; Sakanaka M; Xiao JZ; Odamaki T; Katayama T
    Microbiome Res Rep; 2022; 1(3):20. PubMed ID: 38046362
    [No Abstract]   [Full Text] [Related]  

  • 20. Evaluating and Improving Small Subunit rRNA PCR Primer Coverage for Bacteria, Archaea, and Eukaryotes Using Metagenomes from Global Ocean Surveys.
    McNichol J; Berube PM; Biller SJ; Fuhrman JA
    mSystems; 2021 Jun; 6(3):e0056521. PubMed ID: 34060911
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.