These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

169 related articles for article (PubMed ID: 38551701)

  • 1. Exact p-values for global network alignments via combinatorial analysis of shared GO terms : REFANGO: Rigorous Evaluation of Functional Alignments of Networks using Gene Ontology.
    Hayes WB
    J Math Biol; 2024 Mar; 88(5):50. PubMed ID: 38551701
    [TBL] [Abstract][Full Text] [Related]  

  • 2. SANA NetGO: a combinatorial approach to using Gene Ontology (GO) terms to score network alignments.
    Hayes WB; Mamano N
    Bioinformatics; 2018 Apr; 34(8):1345-1352. PubMed ID: 29228175
    [TBL] [Abstract][Full Text] [Related]  

  • 3. SANA: cross-species prediction of Gene Ontology GO annotations via topological network alignment.
    Wang S; Atkinson GRS; Hayes WB
    NPJ Syst Biol Appl; 2022 Jul; 8(1):25. PubMed ID: 35859153
    [TBL] [Abstract][Full Text] [Related]  

  • 4. On the current failure-but bright future-of topology-driven biological network alignment.
    Wang S; Chen X; Frederisy BJ; Mbakogu BA; Kanne AD; Khosravi P; Hayes WB
    Adv Protein Chem Struct Biol; 2022; 131():1-44. PubMed ID: 35871888
    [TBL] [Abstract][Full Text] [Related]  

  • 5. SAlign-a structure aware method for global PPI network alignment.
    Ayub U; Haider I; Naveed H
    BMC Bioinformatics; 2020 Nov; 21(1):500. PubMed ID: 33148180
    [TBL] [Abstract][Full Text] [Related]  

  • 6. DualAligner: a dual alignment-based strategy to align protein interaction networks.
    Seah BS; Bhowmick SS; Dewey CF
    Bioinformatics; 2014 Sep; 30(18):2619-26. PubMed ID: 24872427
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Fuse: multiple network alignment via data fusion.
    Gligorijević V; Malod-Dognin N; Pržulj N
    Bioinformatics; 2016 Apr; 32(8):1195-203. PubMed ID: 26668003
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Unified Alignment of Protein-Protein Interaction Networks.
    Malod-Dognin N; Ban K; Pržulj N
    Sci Rep; 2017 Apr; 7(1):953. PubMed ID: 28424527
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Global multiple protein-protein interaction network alignment by combining pairwise network alignments.
    Dohrmann J; Puchin J; Singh R
    BMC Bioinformatics; 2015; 16 Suppl 13(Suppl 13):S11. PubMed ID: 26423128
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Integrative network alignment reveals large regions of global network similarity in yeast and human.
    Kuchaiev O; Przulj N
    Bioinformatics; 2011 May; 27(10):1390-6. PubMed ID: 21414992
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Scalable global alignment for multiple biological networks.
    Shih YK; Parthasarathy S
    BMC Bioinformatics; 2012 Mar; 13 Suppl 3(Suppl 3):S11. PubMed ID: 22536895
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A fast approach to global alignment of protein-protein interaction networks.
    Kollias G; Sathe M; Mohammadi S; Grama A
    BMC Res Notes; 2013 Jan; 6():35. PubMed ID: 23363457
    [TBL] [Abstract][Full Text] [Related]  

  • 13. From communities to protein complexes: A local community detection algorithm on PPI networks.
    Dilmaghani S; Brust MR; Ribeiro CHC; Kieffer E; Danoy G; Bouvry P
    PLoS One; 2022; 17(1):e0260484. PubMed ID: 35085263
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Large-scale comparison of protein sequence alignment algorithms with structure alignments.
    Sauder JM; Arthur JW; Dunbrack RL
    Proteins; 2000 Jul; 40(1):6-22. PubMed ID: 10813826
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Using PPI network autocorrelation in hierarchical multi-label classification trees for gene function prediction.
    Stojanova D; Ceci M; Malerba D; Dzeroski S
    BMC Bioinformatics; 2013 Sep; 14():285. PubMed ID: 24070402
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Joint Alignment of Multiple Protein-Protein Interaction Networks via Convex Optimization.
    Hashemifar S; Huang Q; Xu J
    J Comput Biol; 2016 Nov; 23(11):903-911. PubMed ID: 27428933
    [TBL] [Abstract][Full Text] [Related]  

  • 17. An Adaptive Hybrid Algorithm for Global Network Alignment.
    Xie J; Xiang C; Ma J; Tan J; Wen T; Lei J; Nie Q
    IEEE/ACM Trans Comput Biol Bioinform; 2016; 13(3):483-93. PubMed ID: 27295633
    [TBL] [Abstract][Full Text] [Related]  

  • 18. C-GRAAL: common-neighbors-based global GRAph ALignment of biological networks.
    Memišević V; Pržulj N
    Integr Biol (Camb); 2012 Jul; 4(7):734-43. PubMed ID: 22234340
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Protein2Vec: Aligning Multiple PPI Networks with Representation Learning.
    Gao J; Tian L; Lv T; Wang J; Song B; Hu X
    IEEE/ACM Trans Comput Biol Bioinform; 2021; 18(1):240-249. PubMed ID: 31478867
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Topology-function conservation in protein-protein interaction networks.
    Davis D; Yaveroğlu ÖN; Malod-Dognin N; Stojmirovic A; Pržulj N
    Bioinformatics; 2015 May; 31(10):1632-9. PubMed ID: 25609797
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.