BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

186 related articles for article (PubMed ID: 38573983)

  • 1. High-throughput DNA extraction and cost-effective miniaturized metagenome and amplicon library preparation of soil samples for DNA sequencing.
    Jensen TBN; Dall SM; Knutsson S; Karst SM; Albertsen M
    PLoS One; 2024; 19(4):e0301446. PubMed ID: 38573983
    [TBL] [Abstract][Full Text] [Related]  

  • 2. A low-cost pipeline for soil microbiome profiling.
    Bollmann-Giolai A; Giolai M; Heavens D; Macaulay I; Malone J; Clark MD
    Microbiologyopen; 2020 Dec; 9(12):e1133. PubMed ID: 33225533
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Assessment of fecal DNA extraction protocols for metagenomic studies.
    Yang F; Sun J; Luo H; Ren H; Zhou H; Lin Y; Han M; Chen B; Liao H; Brix S; Li J; Yang H; Kristiansen K; Zhong H
    Gigascience; 2020 Jul; 9(7):. PubMed ID: 32657325
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Protocols for metagenomic DNA extraction and Illumina amplicon library preparation for faecal and swab samples.
    Vo AT; Jedlicka JA
    Mol Ecol Resour; 2014 Nov; 14(6):1183-97. PubMed ID: 24774752
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Microbial resolution of whole genome shotgun and 16S amplicon metagenomic sequencing using publicly available NEON data.
    Brumfield KD; Huq A; Colwell RR; Olds JL; Leddy MB
    PLoS One; 2020; 15(2):e0228899. PubMed ID: 32053657
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Evaluation of Host Depletion and Extraction Methods for Shotgun Metagenomic Analysis of Bovine Vaginal Samples.
    Ong CT; Boe-Hansen G; Ross EM; Blackall PJ; Turni C; Hayes BJ; Tabor AE
    Microbiol Spectr; 2022 Apr; 10(2):e0041221. PubMed ID: 35404108
    [TBL] [Abstract][Full Text] [Related]  

  • 7. MinION™ nanopore sequencing of environmental metagenomes: a synthetic approach.
    Brown BL; Watson M; Minot SS; Rivera MC; Franklin RB
    Gigascience; 2017 Mar; 6(3):1-10. PubMed ID: 28327976
    [TBL] [Abstract][Full Text] [Related]  

  • 8. A comparison of six DNA extraction protocols for 16S, ITS and shotgun metagenomic sequencing of microbial communities.
    Shaffer JP; Carpenter CS; Martino C; Salido RA; Minich JJ; Bryant M; Sanders K; Schwartz T; Humphrey G; Swafford AD; Knight R
    Biotechniques; 2022 Jun; 73(1):34-46. PubMed ID: 35713407
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A novel ultra high-throughput 16S rRNA gene amplicon sequencing library preparation method for the Illumina HiSeq platform.
    de Muinck EJ; Trosvik P; Gilfillan GD; Hov JR; Sundaram AYM
    Microbiome; 2017 Jul; 5(1):68. PubMed ID: 28683838
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Evaluation of Methods for the Extraction of Microbial DNA From Vaginal Swabs Used for Microbiome Studies.
    Mattei V; Murugesan S; Al Hashmi M; Mathew R; James N; Singh P; Kumar M; Lakshmanan AP; Terranegra A; Al Khodor S; Tomei S
    Front Cell Infect Microbiol; 2019; 9():197. PubMed ID: 31245304
    [No Abstract]   [Full Text] [Related]  

  • 11. Evaluation of a high-throughput, cost-effective Illumina library preparation kit.
    Tvedte ES; Michalski J; Cheng S; Patkus RS; Tallon LJ; Sadzewicz L; Bruno VM; Silva JC; Rasko DA; Dunning Hotopp JC
    Sci Rep; 2021 Aug; 11(1):15925. PubMed ID: 34354114
    [TBL] [Abstract][Full Text] [Related]  

  • 12. MetCap: a bioinformatics probe design pipeline for large-scale targeted metagenomics.
    Kushwaha SK; Manoharan L; Meerupati T; Hedlund K; Ahrén D
    BMC Bioinformatics; 2015 Feb; 16(1):65. PubMed ID: 25880302
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Evaluation of the Effects of Library Preparation Procedure and Sample Characteristics on the Accuracy of Metagenomic Profiles.
    Gaulke CA; Schmeltzer ER; Dasenko M; Tyler BM; Vega Thurber R; Sharpton TJ
    mSystems; 2021 Oct; 6(5):e0044021. PubMed ID: 34636674
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Library Preparation and Sequencing Platform Introduce Bias in Metagenomic-Based Characterizations of Microbiomes.
    Poulsen CS; Ekstrøm CT; Aarestrup FM; Pamp SJ
    Microbiol Spectr; 2022 Apr; 10(2):e0009022. PubMed ID: 35289669
    [TBL] [Abstract][Full Text] [Related]  

  • 15. High-Throughput Miniaturized 16S rRNA Amplicon Library Preparation Reduces Costs while Preserving Microbiome Integrity.
    Minich JJ; Humphrey G; Benitez RAS; Sanders J; Swafford A; Allen EE; Knight R
    mSystems; 2018; 3(6):. PubMed ID: 30417111
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Practical considerations for sampling and data analysis in contemporary metagenomics-based environmental studies.
    Staley C; Sadowsky MJ
    J Microbiol Methods; 2018 Nov; 154():14-18. PubMed ID: 30287354
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Comparison of the sequencing bias of currently available library preparation kits for Illumina sequencing of bacterial genomes and metagenomes.
    Sato MP; Ogura Y; Nakamura K; Nishida R; Gotoh Y; Hayashi M; Hisatsune J; Sugai M; Takehiko I; Hayashi T
    DNA Res; 2019 Oct; 26(5):391-398. PubMed ID: 31364694
    [TBL] [Abstract][Full Text] [Related]  

  • 18. A Simple, Cost-Effective, and Automation-Friendly Direct PCR Approach for Bacterial Community Analysis.
    Song F; Kuehl JV; Chandran A; Arkin AP
    mSystems; 2021 Oct; 6(5):e0022421. PubMed ID: 34581599
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Reducing costs for DNA and RNA sequencing by sample pooling using a metagenomic approach.
    Teufel M; Sobetzko P
    BMC Genomics; 2022 Aug; 23(1):613. PubMed ID: 35999507
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Characterization and Demonstration of Mock Communities as Control Reagents for Accurate Human Microbiome Community Measurements.
    Tourlousse DM; Narita K; Miura T; Ohashi A; Matsuda M; Ohyama Y; Shimamura M; Furukawa M; Kasahara K; Kameyama K; Saito S; Goto M; Shimizu R; Mishima R; Nakayama J; Hosomi K; Kunisawa J; Terauchi J; Sekiguchi Y; Kawasaki H
    Microbiol Spectr; 2022 Apr; 10(2):e0191521. PubMed ID: 35234490
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.