These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
3. Translational repression of the McKusick-Kaufman syndrome transcript by unique upstream open reading frames encoding mitochondrial proteins with alternative polyadenylation sites. Akimoto C; Sakashita E; Kasashima K; Kuroiwa K; Tominaga K; Hamamoto T; Endo H Biochim Biophys Acta; 2013 Mar; 1830(3):2728-38. PubMed ID: 23671934 [TBL] [Abstract][Full Text] [Related]
4. Genome-wide identification of Arabidopsis non-AUG-initiated upstream ORFs with evolutionarily conserved regulatory sequences that control protein expression levels. Hiragori Y; Takahashi H; Karino T; Kaido A; Hayashi N; Sasaki S; Nakao K; Motomura T; Yamashita Y; Naito S; Onouchi H Plant Mol Biol; 2023 Jan; 111(1-2):37-55. PubMed ID: 36044152 [TBL] [Abstract][Full Text] [Related]
5. Impacts of uORF codon identity and position on translation regulation. Lin Y; May GE; Kready H; Nazzaro L; Mao M; Spealman P; Creeger Y; McManus CJ Nucleic Acids Res; 2019 Sep; 47(17):9358-9367. PubMed ID: 31392980 [TBL] [Abstract][Full Text] [Related]
6. Dual modes of natural selection on upstream open reading frames. Neafsey DE; Galagan JE Mol Biol Evol; 2007 Aug; 24(8):1744-51. PubMed ID: 17494029 [TBL] [Abstract][Full Text] [Related]
7. Translation of TNFAIP2 is tightly controlled by upstream open reading frames. Scholz A; Rappl P; Böffinger N; Mota AC; Brüne B; Schmid T Cell Mol Life Sci; 2020 May; 77(10):2017-2027. PubMed ID: 31392347 [TBL] [Abstract][Full Text] [Related]
8. Ribo-uORF: a comprehensive data resource of upstream open reading frames (uORFs) based on ribosome profiling. Liu Q; Peng X; Shen M; Qian Q; Xing J; Li C; Gregory RI Nucleic Acids Res; 2023 Jan; 51(D1):D248-D261. PubMed ID: 36440758 [TBL] [Abstract][Full Text] [Related]
9. Conservation of uORF repressiveness and sequence features in mouse, human and zebrafish. Chew GL; Pauli A; Schier AF Nat Commun; 2016 May; 7():11663. PubMed ID: 27216465 [TBL] [Abstract][Full Text] [Related]
10. Translational buffering by ribosome stalling in upstream open reading frames. Bottorff TA; Park H; Geballe AP; Subramaniam AR PLoS Genet; 2022 Oct; 18(10):e1010460. PubMed ID: 36315596 [TBL] [Abstract][Full Text] [Related]
12. PRPF19 mRNA Encodes a Small Open Reading Frame That Is Important for Viability of Human Cells. Shepelev NM; Kurochkina AO; Dontsova OA; Rubtsova MP Dokl Biochem Biophys; 2024 Apr; 515(1):41-47. PubMed ID: 38472668 [TBL] [Abstract][Full Text] [Related]
13. Upstream open reading frames regulate translation of the long isoform of SLAMF1 mRNA that encodes costimulatory receptor CD150. Putlyaeva LV; Schwartz AM; Korneev KV; Covic M; Uroshlev LA; Makeev VY; Dmitriev SE; Kuprash DV Biochemistry (Mosc); 2014 Dec; 79(12):1405-11. PubMed ID: 25716736 [TBL] [Abstract][Full Text] [Related]
14. An upstream open reading frame regulates translation of GADD34 during cellular stresses that induce eIF2alpha phosphorylation. Lee YY; Cevallos RC; Jan E J Biol Chem; 2009 Mar; 284(11):6661-73. PubMed ID: 19131336 [TBL] [Abstract][Full Text] [Related]
15. Upstream open reading frames cause widespread reduction of protein expression and are polymorphic among humans. Calvo SE; Pagliarini DJ; Mootha VK Proc Natl Acad Sci U S A; 2009 May; 106(18):7507-12. PubMed ID: 19372376 [TBL] [Abstract][Full Text] [Related]
16. Translation reinitiation after uORFs does not fully protect mRNAs from nonsense-mediated decay. Russell PJ; Slivka JA; Boyle EP; Burghes AHM; Kearse MG RNA; 2023 Jun; 29(6):735-744. PubMed ID: 36878710 [TBL] [Abstract][Full Text] [Related]
17. Plant transcripts with long or structured upstream open reading frames in the NDL2 5' UTR can escape nonsense-mediated mRNA decay in a reinitiation-independent manner. Cymerman MA; Saul H; Farhi R; Vexler K; Gottlieb D; Berezin I; Shaul O J Exp Bot; 2023 Jan; 74(1):91-103. PubMed ID: 36169317 [TBL] [Abstract][Full Text] [Related]
18. Some like it translated: small ORFs in the 5'UTR. Renz PF; Valdivia-Francia F; Sendoel A Exp Cell Res; 2020 Nov; 396(1):112229. PubMed ID: 32818479 [TBL] [Abstract][Full Text] [Related]
19. uORF-Tools-Workflow for the determination of translation-regulatory upstream open reading frames. Scholz A; Eggenhofer F; Gelhausen R; Grüning B; Zarnack K; Brüne B; Backofen R; Schmid T PLoS One; 2019; 14(9):e0222459. PubMed ID: 31513641 [TBL] [Abstract][Full Text] [Related]
20. The two upstream open reading frames of oncogene mdm2 have different translational regulatory properties. Jin X; Turcott E; Englehardt S; Mize GJ; Morris DR J Biol Chem; 2003 Jul; 278(28):25716-21. PubMed ID: 12730202 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]