BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

160 related articles for article (PubMed ID: 38594897)

  • 1. Inserting Pre-analytical Chromatographic Priming Runs Significantly Improves Targeted Pathway Proteomics with Sample Multiplexing.
    Shuken SR; Yu Q; Gygi SP
    J Proteome Res; 2024 May; 23(5):1834-1843. PubMed ID: 38594897
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Inserting Pre-Analytical Chromatographic Priming Runs Significantly Improves Targeted Pathway Proteomics With Sample Multiplexing.
    Shuken SR; Yu Q; Gygi SP
    bioRxiv; 2024 Feb; ():. PubMed ID: 38370708
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Adapting an Isobaric Tag-Labeled Yeast Peptide Standard to Develop Targeted Proteomics Assays.
    Dong KD; Schmid EW; Bomgarden RD; Choi JH; Gygi SP; Yu Q; Paulo JA
    J Proteome Res; 2024 Jan; 23(1):142-148. PubMed ID: 38009700
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Combining Targeted and Untargeted Data Acquisition to Enhance Quantitative Plant Proteomics Experiments.
    Hart-Smith G
    Methods Mol Biol; 2020; 2139():169-178. PubMed ID: 32462586
    [TBL] [Abstract][Full Text] [Related]  

  • 5. MultiAlign: a multiple LC-MS analysis tool for targeted omics analysis.
    LaMarche BL; Crowell KL; Jaitly N; Petyuk VA; Shah AR; Polpitiya AD; Sandoval JD; Kiebel GR; Monroe ME; Callister SJ; Metz TO; Anderson GA; Smith RD
    BMC Bioinformatics; 2013 Feb; 14():49. PubMed ID: 23398735
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Information-dependent LC-MS/MS acquisition with exclusion lists potentially generated on-the-fly: case study using a whole cell digest of Clostridium thermocellum.
    McQueen P; Spicer V; Rydzak T; Sparling R; Levin D; Wilkins JA; Krokhin O
    Proteomics; 2012 Apr; 12(8):1160-9. PubMed ID: 22577018
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A Combination of DNA-peptide Probes and Liquid Chromatography-Tandem Mass Spectrometry (LC-MS/MS): A Quasi-Targeted Proteomics Approach for Multiplexed MicroRNA Quantification.
    Xu F; Zhou W; Cao J; Xu Q; Jiang D; Chen Y
    Theranostics; 2017; 7(11):2849-2862. PubMed ID: 28824720
    [TBL] [Abstract][Full Text] [Related]  

  • 8. TomahaqCompanion: A Tool for the Creation and Analysis of Isobaric Label Based Multiplexed Targeted Assays.
    Rose CM; Erickson BK; Schweppe DK; Viner R; Choi J; Rogers J; Bomgarden R; Gygi SP; Kirkpatrick DS
    J Proteome Res; 2019 Feb; 18(2):594-605. PubMed ID: 30501201
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Enhanced characterization of complex proteomic samples using LC-MALDI MS/MS: exclusion of redundant peptides from MS/MS analysis in replicate runs.
    Chen HS; Rejtar T; Andreev V; Moskovets E; Karger BL
    Anal Chem; 2005 Dec; 77(23):7816-25. PubMed ID: 16316193
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Qualitative and Quantitative Shotgun Proteomics Data Analysis from Data-Dependent Acquisition Mass Spectrometry.
    Meyer JG
    Methods Mol Biol; 2021; 2259():297-308. PubMed ID: 33687723
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Sample multiplexing-based targeted pathway proteomics with real-time analytics reveals the impact of genetic variation on protein expression.
    Yu Q; Liu X; Keller MP; Navarrete-Perea J; Zhang T; Fu S; Vaites LP; Shuken SR; Schmid E; Keele GR; Li J; Huttlin EL; Rashan EH; Simcox J; Churchill GA; Schweppe DK; Attie AD; Paulo JA; Gygi SP
    Nat Commun; 2023 Feb; 14(1):555. PubMed ID: 36732331
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Micro-Data-Independent Acquisition for High-Throughput Proteomics and Sensitive Peptide Mass Spectrum Identification.
    Heaven MR; Cobbs AL; Nei YW; Gutierrez DB; Herren AW; Gunawardena HP; Caprioli RM; Norris JL
    Anal Chem; 2018 Aug; 90(15):8905-8911. PubMed ID: 29984981
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Deep Profiling of Proteome and Phosphoproteome by Isobaric Labeling, Extensive Liquid Chromatography, and Mass Spectrometry.
    Bai B; Tan H; Pagala VR; High AA; Ichhaporia VP; Hendershot L; Peng J
    Methods Enzymol; 2017; 585():377-395. PubMed ID: 28109439
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Quantitative protein profiling by mass spectrometry using label-free proteomics.
    Haqqani AS; Kelly JF; Stanimirovic DB
    Methods Mol Biol; 2008; 439():241-56. PubMed ID: 18370108
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Comparison of liquid chromatography-tandem mass spectrometry-based targeted proteomics and conventional analytical methods for the determination of P-glycoprotein in human breast cancer cells.
    Yang T; Xu F; Xu J; Fang D; Yu Y; Chen Y
    J Chromatogr B Analyt Technol Biomed Life Sci; 2013 Oct; 936():18-24. PubMed ID: 23968647
    [TBL] [Abstract][Full Text] [Related]  

  • 16. High-resolution enabled 12-plex DiLeu isobaric tags for quantitative proteomics.
    Frost DC; Greer T; Li L
    Anal Chem; 2015 Feb; 87(3):1646-54. PubMed ID: 25405479
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Deep Proteome Profiling by Isobaric Labeling, Extensive Liquid Chromatography, Mass Spectrometry, and Software-assisted Quantification.
    High AA; Tan H; Pagala VR; Niu M; Cho JH; Wang X; Bai B; Peng J
    J Vis Exp; 2017 Nov; (129):. PubMed ID: 29286450
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Trends in the Design of New Isobaric Labeling Reagents for Quantitative Proteomics.
    Bąchor R; Waliczek M; Stefanowicz P; Szewczuk Z
    Molecules; 2019 Feb; 24(4):. PubMed ID: 30781343
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Simultaneous quantification of protein phosphorylation sites using liquid chromatography-tandem mass spectrometry-based targeted proteomics: a linear algebra approach for isobaric phosphopeptides.
    Xu F; Yang T; Sheng Y; Zhong T; Yang M; Chen Y
    J Proteome Res; 2014 Dec; 13(12):5452-60. PubMed ID: 25403019
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Multiple Reaction Monitoring Using Double Isotopologue Peptide Standards for Protein Quantification.
    Eshghi A; Borchers CH
    Methods Mol Biol; 2018; 1788():193-214. PubMed ID: 29256172
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.