These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

138 related articles for article (PubMed ID: 38604415)

  • 1. Experimental and computational approaches for membrane protein insertion and topology determination.
    Duart G; Graña-Montes R; Pastor-Cantizano N; Mingarro I
    Methods; 2024 Jun; 226():102-119. PubMed ID: 38604415
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Biological insertion of computationally designed short transmembrane segments.
    Baeza-Delgado C; von Heijne G; Marti-Renom MA; Mingarro I
    Sci Rep; 2016 Mar; 6():23397. PubMed ID: 26987712
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Predicting Alpha Helical Transmembrane Proteins Using HMMs.
    Tsaousis GN; Theodoropoulou MC; Hamodrakas SJ; Bagos PG
    Methods Mol Biol; 2017; 1552():63-82. PubMed ID: 28224491
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Membrane topology and insertion of membrane proteins: search for topogenic signals.
    van Geest M; Lolkema JS
    Microbiol Mol Biol Rev; 2000 Mar; 64(1):13-33. PubMed ID: 10704472
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Bioinformatic approaches for the structure and function of membrane proteins.
    Nam HJ; Jeon J; Kim S
    BMB Rep; 2009 Nov; 42(11):697-704. PubMed ID: 19944009
    [TBL] [Abstract][Full Text] [Related]  

  • 6. The use of functional domains to improve transmembrane protein topology prediction.
    Xu EW; Kearney P; Brown DG
    J Bioinform Comput Biol; 2006 Feb; 4(1):109-23. PubMed ID: 16568545
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Topology of membrane proteins-predictions, limitations and variations.
    Tsirigos KD; Govindarajan S; Bassot C; Västermark Å; Lamb J; Shu N; Elofsson A
    Curr Opin Struct Biol; 2018 Jun; 50():9-17. PubMed ID: 29100082
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Comparative analysis of the packing topology of structurally important residues in helical membrane and soluble proteins.
    Pabuwal V; Li Z
    Protein Eng Des Sel; 2009 Feb; 22(2):67-73. PubMed ID: 19054790
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Prediction of the human membrane proteome.
    Fagerberg L; Jonasson K; von Heijne G; Uhlén M; Berglund L
    Proteomics; 2010 Mar; 10(6):1141-9. PubMed ID: 20175080
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Computational modeling of membrane proteins.
    Koehler Leman J; Ulmschneider MB; Gray JJ
    Proteins; 2015 Jan; 83(1):1-24. PubMed ID: 25355688
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Structure prediction of membrane proteins.
    Zhou C; Zheng Y; Zhou Y
    Genomics Proteomics Bioinformatics; 2004 Feb; 2(1):1-5. PubMed ID: 15629037
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Predicting Beta Barrel Transmembrane Proteins Using HMMs.
    Tsaousis GN; Hamodrakas SJ; Bagos PG
    Methods Mol Biol; 2017; 1552():43-61. PubMed ID: 28224490
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Membrane proteins structures: A review on computational modeling tools.
    Almeida JG; Preto AJ; Koukos PI; Bonvin AMJJ; Moreira IS
    Biochim Biophys Acta Biomembr; 2017 Oct; 1859(10):2021-2039. PubMed ID: 28716627
    [TBL] [Abstract][Full Text] [Related]  

  • 14. An improved hidden Markov model for transmembrane protein detection and topology prediction and its applications to complete genomes.
    Kahsay RY; Gao G; Liao L
    Bioinformatics; 2005 May; 21(9):1853-8. PubMed ID: 15691854
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Computational studies of membrane proteins: models and predictions for biological understanding.
    Liang J; Naveed H; Jimenez-Morales D; Adamian L; Lin M
    Biochim Biophys Acta; 2012 Apr; 1818(4):927-41. PubMed ID: 22051023
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Improved membrane protein topology prediction by domain assignments.
    Bernsel A; Von Heijne G
    Protein Sci; 2005 Jul; 14(7):1723-8. PubMed ID: 15987901
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Optimal mutation sites for PRE data collection and membrane protein structure prediction.
    Chen H; Ji F; Olman V; Mobley CK; Liu Y; Zhou Y; Bushweller JH; Prestegard JH; Xu Y
    Structure; 2011 Apr; 19(4):484-95. PubMed ID: 21481772
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Prediction of partial membrane protein topologies using a consensus approach.
    Nilsson J; Persson B; Von Heijne G
    Protein Sci; 2002 Dec; 11(12):2974-80. PubMed ID: 12441395
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Prediction of the translocon-mediated membrane insertion free energies of protein sequences.
    Park Y; Helms V
    Bioinformatics; 2008 May; 24(10):1271-7. PubMed ID: 18388143
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Computational design of membrane proteins.
    Perez-Aguilar JM; Saven JG
    Structure; 2012 Jan; 20(1):5-14. PubMed ID: 22244752
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.