These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

188 related articles for article (PubMed ID: 38662570)

  • 21. AGGRESCAN: a server for the prediction and evaluation of "hot spots" of aggregation in polypeptides.
    Conchillo-Solé O; de Groot NS; Avilés FX; Vendrell J; Daura X; Ventura S
    BMC Bioinformatics; 2007 Feb; 8():65. PubMed ID: 17324296
    [TBL] [Abstract][Full Text] [Related]  

  • 22. SODA: prediction of protein solubility from disorder and aggregation propensity.
    Paladin L; Piovesan D; Tosatto SCE
    Nucleic Acids Res; 2017 Jul; 45(W1):W236-W240. PubMed ID: 28505312
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Protein denaturation and aggregation: Cellular responses to denatured and aggregated proteins.
    Meredith SC
    Ann N Y Acad Sci; 2005 Dec; 1066():181-221. PubMed ID: 16533927
    [TBL] [Abstract][Full Text] [Related]  

  • 24. iFrag: A Protein-Protein Interface Prediction Server Based on Sequence Fragments.
    Garcia-Garcia J; Valls-Comamala V; Guney E; Andreu D; Muñoz FJ; Fernandez-Fuentes N; Oliva B
    J Mol Biol; 2017 Feb; 429(3):382-389. PubMed ID: 27956148
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Protein Block Expert (PBE): a web-based protein structure analysis server using a structural alphabet.
    Tyagi M; Sharma P; Swamy CS; Cadet F; Srinivasan N; de Brevern AG; Offmann B
    Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W119-23. PubMed ID: 16844973
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Protein aggregation and amyloid fibril formation prediction software from primary sequence: towards controlling the formation of bacterial inclusion bodies.
    Hamodrakas SJ
    FEBS J; 2011 Jul; 278(14):2428-35. PubMed ID: 21569208
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Porins and Amyloids are Coded by Similar Sequence Motifs.
    Villain E; Nikekhin AA; Kajava AV
    Proteomics; 2019 Mar; 19(6):e1800075. PubMed ID: 30358094
    [TBL] [Abstract][Full Text] [Related]  

  • 28. AGGRESCAN3D (A3D): server for prediction of aggregation properties of protein structures.
    Zambrano R; Jamroz M; Szczasiuk A; Pujols J; Kmiecik S; Ventura S
    Nucleic Acids Res; 2015 Jul; 43(W1):W306-13. PubMed ID: 25883144
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Insights into the Molecular Mechanisms of Alzheimer's and Parkinson's Diseases with Molecular Simulations: Understanding the Roles of Artificial and Pathological Missense Mutations in Intrinsically Disordered Proteins Related to Pathology.
    Coskuner-Weber O; Uversky VN
    Int J Mol Sci; 2018 Jan; 19(2):. PubMed ID: 29364151
    [TBL] [Abstract][Full Text] [Related]  

  • 30. ANuPP: A Versatile Tool to Predict Aggregation Nucleating Regions in Peptides and Proteins.
    Prabakaran R; Rawat P; Kumar S; Michael Gromiha M
    J Mol Biol; 2021 May; 433(11):166707. PubMed ID: 33972019
    [TBL] [Abstract][Full Text] [Related]  

  • 31. APDB: a web server to evaluate the accuracy of sequence alignments using structural information.
    Armougom F; Poirot O; Moretti S; Higgins DG; Bucher P; Keduas V; Notredame C
    Bioinformatics; 2006 Oct; 22(19):2439-40. PubMed ID: 17032685
    [TBL] [Abstract][Full Text] [Related]  

  • 32. BlockLogo: visualization of peptide and sequence motif conservation.
    Olsen LR; Kudahl UJ; Simon C; Sun J; Schönbach C; Reinherz EL; Zhang GL; Brusic V
    J Immunol Methods; 2013 Dec; 400-401():37-44. PubMed ID: 24001880
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Fully automated ab initio protein structure prediction using I-SITES, HMMSTR and ROSETTA.
    Bystroff C; Shao Y
    Bioinformatics; 2002; 18 Suppl 1():S54-61. PubMed ID: 12169531
    [TBL] [Abstract][Full Text] [Related]  

  • 34. 3MOTIF: visualizing conserved protein sequence motifs in the protein structure database.
    Bennett SP; Nevill-Manning CG; Brutlag DL
    Bioinformatics; 2003 Mar; 19(4):541-2. PubMed ID: 12611811
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Exploring the sequence determinants of amyloid structure using position-specific scoring matrices.
    Maurer-Stroh S; Debulpaep M; Kuemmerer N; Lopez de la Paz M; Martins IC; Reumers J; Morris KL; Copland A; Serpell L; Serrano L; Schymkowitz JW; Rousseau F
    Nat Methods; 2010 Mar; 7(3):237-42. PubMed ID: 20154676
    [TBL] [Abstract][Full Text] [Related]  

  • 36. From the Evolution of Protein Sequences Able to Resist Self-Assembly to the Prediction of Aggregation Propensity.
    Bemporad F; Ramazzotti M
    Int Rev Cell Mol Biol; 2017; 329():1-47. PubMed ID: 28109326
    [TBL] [Abstract][Full Text] [Related]  

  • 37. MEME: discovering and analyzing DNA and protein sequence motifs.
    Bailey TL; Williams N; Misleh C; Li WW
    Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W369-73. PubMed ID: 16845028
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Exploring the sequence features determining amyloidosis in human antibody light chains.
    Rawat P; Prabakaran R; Kumar S; Gromiha MM
    Sci Rep; 2021 Jul; 11(1):13785. PubMed ID: 34215782
    [TBL] [Abstract][Full Text] [Related]  

  • 39. FunClust: a web server for the identification of structural motifs in a set of non-homologous protein structures.
    Ausiello G; Gherardini PF; Marcatili P; Tramontano A; Via A; Helmer-Citterich M
    BMC Bioinformatics; 2008 Mar; 9 Suppl 2(Suppl 2):S2. PubMed ID: 18387204
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Potential aggregation prone regions in biotherapeutics: A survey of commercial monoclonal antibodies.
    Wang X; Das TK; Singh SK; Kumar S
    MAbs; 2009; 1(3):254-67. PubMed ID: 20065649
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 10.