These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

266 related articles for article (PubMed ID: 38709794)

  • 1. Annotation of nuclear lncRNAs based on chromatin interactions.
    Agrawal S; Buyan A; Severin J; Koido M; Alam T; Abugessaisa I; Chang HY; Dostie J; Itoh M; Kere J; Kondo N; Li Y; Makeev VJ; Mendez M; Okazaki Y; Ramilowski JA; Sigorskikh AI; Strug LJ; Yagi K; Yasuzawa K; Yip CW; Hon CC; Hoffman MM; Terao C; Kulakovskiy IV; Kasukawa T; Shin JW; Carninci P; de Hoon MJL
    PLoS One; 2024; 19(5):e0295971. PubMed ID: 38709794
    [TBL] [Abstract][Full Text] [Related]  

  • 2. FANTOM enters 20th year: expansion of transcriptomic atlases and functional annotation of non-coding RNAs.
    Abugessaisa I; Ramilowski JA; Lizio M; Severin J; Hasegawa A; Harshbarger J; Kondo A; Noguchi S; Yip CW; Ooi JLC; Tagami M; Hori F; Agrawal S; Hon CC; Cardon M; Ikeda S; Ono H; Bono H; Kato M; Hashimoto K; Bonetti A; Kato M; Kobayashi N; Shin J; de Hoon M; Hayashizaki Y; Carninci P; Kawaji H; Kasukawa T
    Nucleic Acids Res; 2021 Jan; 49(D1):D892-D898. PubMed ID: 33211864
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Nuclear Fractionation Reveals Thousands of Chromatin-Tethered Noncoding RNAs Adjacent to Active Genes.
    Werner MS; Ruthenburg AJ
    Cell Rep; 2015 Aug; 12(7):1089-98. PubMed ID: 26257179
    [TBL] [Abstract][Full Text] [Related]  

  • 4. LncRNA ontology: inferring lncRNA functions based on chromatin states and expression patterns.
    Li Y; Chen H; Pan T; Jiang C; Zhao Z; Wang Z; Zhang J; Xu J; Li X
    Oncotarget; 2015 Nov; 6(37):39793-805. PubMed ID: 26485761
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Long noncoding RNAs: an emerging link between gene regulation and nuclear organization.
    Quinodoz S; Guttman M
    Trends Cell Biol; 2014 Nov; 24(11):651-63. PubMed ID: 25441720
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Comprehensive analysis of long noncoding RNA (lncRNA)-chromatin interactions reveals lncRNA functions dependent on binding diverse regulatory elements.
    Zhang G; Lan Y; Xie A; Shi J; Zhao H; Xu L; Zhu S; Luo T; Zhao T; Xiao Y; Li X
    J Biol Chem; 2019 Oct; 294(43):15613-15622. PubMed ID: 31484726
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Transcriptional regulatory functions of nuclear long noncoding RNAs.
    Vance KW; Ponting CP
    Trends Genet; 2014 Aug; 30(8):348-55. PubMed ID: 24974018
    [TBL] [Abstract][Full Text] [Related]  

  • 8. RNA in chromatin organization and nuclear architecture.
    Palihati M; Saitoh N
    Curr Opin Genet Dev; 2024 Jun; 86():102176. PubMed ID: 38490161
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Mechanisms of Long Noncoding RNA Nuclear Retention.
    Guo CJ; Xu G; Chen LL
    Trends Biochem Sci; 2020 Nov; 45(11):947-960. PubMed ID: 32800670
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Nuclear Long Noncoding RNAs: Key Regulators of Gene Expression.
    Sun Q; Hao Q; Prasanth KV
    Trends Genet; 2018 Feb; 34(2):142-157. PubMed ID: 29249332
    [TBL] [Abstract][Full Text] [Related]  

  • 11. U1 snRNP regulates chromatin retention of noncoding RNAs.
    Yin Y; Lu JY; Zhang X; Shao W; Xu Y; Li P; Hong Y; Cui L; Shan G; Tian B; Zhang QC; Shen X
    Nature; 2020 Apr; 580(7801):147-150. PubMed ID: 32238924
    [TBL] [Abstract][Full Text] [Related]  

  • 12. The Properties of Long Noncoding RNAs That Regulate Chromatin.
    Rutenberg-Schoenberg M; Sexton AN; Simon MD
    Annu Rev Genomics Hum Genet; 2016 Aug; 17():69-94. PubMed ID: 27147088
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Very long intergenic non-coding (vlinc) RNAs directly regulate multiple genes in cis and trans.
    Cao H; Xu D; Cai Y; Han X; Tang L; Gao F; Qi Y; Cai D; Wang H; Ri M; Antonets D; Vyatkin Y; Chen Y; You X; Wang F; Nicolas E; Kapranov P
    BMC Biol; 2021 May; 19(1):108. PubMed ID: 34016118
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Expression Specificity of Disease-Associated lncRNAs: Toward Personalized Medicine.
    Nguyen Q; Carninci P
    Curr Top Microbiol Immunol; 2016; 394():237-58. PubMed ID: 26318140
    [TBL] [Abstract][Full Text] [Related]  

  • 15. The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression.
    Derrien T; Johnson R; Bussotti G; Tanzer A; Djebali S; Tilgner H; Guernec G; Martin D; Merkel A; Knowles DG; Lagarde J; Veeravalli L; Ruan X; Ruan Y; Lassmann T; Carninci P; Brown JB; Lipovich L; Gonzalez JM; Thomas M; Davis CA; Shiekhattar R; Gingeras TR; Hubbard TJ; Notredame C; Harrow J; Guigó R
    Genome Res; 2012 Sep; 22(9):1775-89. PubMed ID: 22955988
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Long noncoding RNAs as Organizers of Nuclear Architecture.
    Cheng L; Ming H; Zhu M; Wen B
    Sci China Life Sci; 2016 Mar; 59(3):236-44. PubMed ID: 26825945
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Long non-coding RNAs: definitions, functions, challenges and recommendations.
    Mattick JS; Amaral PP; Carninci P; Carpenter S; Chang HY; Chen LL; Chen R; Dean C; Dinger ME; Fitzgerald KA; Gingeras TR; Guttman M; Hirose T; Huarte M; Johnson R; Kanduri C; Kapranov P; Lawrence JB; Lee JT; Mendell JT; Mercer TR; Moore KJ; Nakagawa S; Rinn JL; Spector DL; Ulitsky I; Wan Y; Wilusz JE; Wu M
    Nat Rev Mol Cell Biol; 2023 Jun; 24(6):430-447. PubMed ID: 36596869
    [TBL] [Abstract][Full Text] [Related]  

  • 18. LncRNA-Chromatin Pull-Down Using Biotin-Conjugated DNA Probes.
    Sarkar D; Diermeier SD
    Methods Mol Biol; 2022; 2458():345-357. PubMed ID: 35103977
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Perspectives on the mechanism of transcriptional regulation by long non-coding RNAs.
    Roberts TC; Morris KV; Weinberg MS
    Epigenetics; 2014 Jan; 9(1):13-20. PubMed ID: 24149621
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Super-lncRNAs: identification of lncRNAs that target super-enhancers via RNA:DNA:DNA triplex formation.
    Soibam B
    RNA; 2017 Nov; 23(11):1729-1742. PubMed ID: 28839111
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 14.