BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

155 related articles for article (PubMed ID: 38713383)

  • 21. Full-Length 16S rRNA Gene Analysis Using Long-Read Nanopore Sequencing for Rapid Identification of Bacteria from Clinical Specimens.
    Matsuo Y
    Methods Mol Biol; 2023; 2632():193-213. PubMed ID: 36781730
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Effects of Waterlogging on Soybean Rhizosphere Bacterial Community Using V4, LoopSeq, and PacBio 16S rRNA Sequence.
    Yu T; Cheng L; Liu Q; Wang S; Zhou Y; Zhong H; Tang M; Nian H; Lian T
    Microbiol Spectr; 2022 Feb; 10(1):e0201121. PubMed ID: 35171049
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Comparative evaluation of analytical pipelines for illumina short- and nanopore long-read 16S rRNA gene amplicon sequencing with mock microbial communities.
    Ota Y; Yasunaga K; Mahazu S; Prah I; Nagai S; Hayashi T; Suzuki M; Yoshida M; Hoshino Y; Akeda Y; Suzuki T; Gu Y; Saito R
    J Microbiol Methods; 2024 Jun; 221():106929. PubMed ID: 38599390
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Generation of Comprehensive Ecosystem-Specific Reference Databases with Species-Level Resolution by High-Throughput Full-Length 16S rRNA Gene Sequencing and Automated Taxonomy Assignment (AutoTax).
    Dueholm MS; Andersen KS; McIlroy SJ; Kristensen JM; Yashiro E; Karst SM; Albertsen M; Nielsen PH
    mBio; 2020 Sep; 11(5):. PubMed ID: 32963001
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Microbial Identification Using rRNA Operon Region: Database and Tool for Metataxonomics with Long-Read Sequence.
    Seol D; Lim JS; Sung S; Lee YH; Jeong M; Cho S; Kwak W; Kim H
    Microbiol Spectr; 2022 Apr; 10(2):e0201721. PubMed ID: 35352997
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Enhanced phylogenetic insights into the microbiome of chronic rhinosinusitis through the novel application of long read 16S rRNA gene amplicon sequencing.
    Connell JT; Yeo K; Bouras G; Bassiouni A; Fenix K; Cooksley C; Vreugde S; Wormald PJ; Psaltis AJ
    Rhinology; 2024 Apr; 62(2):152-162. PubMed ID: 38165666
    [TBL] [Abstract][Full Text] [Related]  

  • 27. rpoB, a promising marker for analyzing the diversity of bacterial communities by amplicon sequencing.
    Ogier JC; Pagès S; Galan M; Barret M; Gaudriault S
    BMC Microbiol; 2019 Jul; 19(1):171. PubMed ID: 31357928
    [TBL] [Abstract][Full Text] [Related]  

  • 28. A preliminary study on the potential of Nanopore MinION and Illumina MiSeq 16S rRNA gene sequencing to characterize building-dust microbiomes.
    Nygaard AB; Tunsjø HS; Meisal R; Charnock C
    Sci Rep; 2020 Feb; 10(1):3209. PubMed ID: 32081924
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Evaluation of PacBio sequencing for full-length bacterial 16S rRNA gene classification.
    Wagner J; Coupland P; Browne HP; Lawley TD; Francis SC; Parkhill J
    BMC Microbiol; 2016 Nov; 16(1):274. PubMed ID: 27842515
    [TBL] [Abstract][Full Text] [Related]  

  • 30. A multi-amplicon 16S rRNA sequencing and analysis method for improved taxonomic profiling of bacterial communities.
    Schriefer AE; Cliften PF; Hibberd MC; Sawyer C; Brown-Kennerly V; Burcea L; Klotz E; Crosby SD; Gordon JI; Head RD
    J Microbiol Methods; 2018 Nov; 154():6-13. PubMed ID: 30273610
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Identification of environmental Actinobacteria in buildings by means of chemotaxonomy, 16S rRNA sequencing, and MALDI-TOF MS.
    Chudzik A; Jalkanen K; Täubel M; Szponar B; Paściak M
    Microbiol Spectr; 2024 Mar; 12(3):e0359623. PubMed ID: 38299830
    [TBL] [Abstract][Full Text] [Related]  

  • 32. MinION™ Nanopore Sequencing of Skin Microbiome 16S and 16S-23S rRNA Gene Amplicons.
    Rozas M; Brillet F; Callewaert C; Paetzold B
    Front Cell Infect Microbiol; 2021; 11():806476. PubMed ID: 35071053
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Evaluation of Full-Length Versus V4-Region 16S rRNA Sequencing for Phylogenetic Analysis of Mouse Intestinal Microbiota After a Dietary Intervention.
    Katiraei S; Anvar Y; Hoving L; Berbée JFP; van Harmelen V; Willems van Dijk K
    Curr Microbiol; 2022 Jul; 79(9):276. PubMed ID: 35907023
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Species-Level Identification of Actinomyces Isolates Causing Invasive Infections: Multiyear Comparison of Vitek MS (Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry) to Partial Sequencing of the 16S rRNA Gene.
    Lynch T; Gregson D; Church DL
    J Clin Microbiol; 2016 Mar; 54(3):712-7. PubMed ID: 26739153
    [TBL] [Abstract][Full Text] [Related]  

  • 35. TARGETING THE 16S RRNA GENE FOR BACTERIAL IDENTIFICATION IN COMPLEX MIXED SAMPLES: COMPARATIVE EVALUATION OF SECOND (ILLUMINA) AND THIRD (OXFORD NANOPORE TECHNOLOGIES) GENERATION SEQUENCING TECHNOLOGIES.
    Winand R; Bogaerts B; Hoffman S; Lefevre L; Delvoye M; Braekel JV; Fu Q; Roosens NH; Keersmaecker SC; Vanneste K
    Int J Mol Sci; 2019 Dec; 21(1):. PubMed ID: 31906254
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Multi-year comparison of VITEK® MS and 16S rRNA gene sequencing performance for the identification of rarely encountered anaerobes causing invasive human infections in a large Canadian region: can our laboratory abandon 16S rRNA gene sequencing?
    Church DL; Griener T; Gregson D
    Anaerobe; 2022 Dec; 78():102640. PubMed ID: 36126828
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Comparison of Biolog GEN III MicroStation semi-automated bacterial identification system with matrix-assisted laser desorption ionization-time of flight mass spectrometry and 16S ribosomal RNA gene sequencing for the identification of bacteria of veterinary interest.
    Wragg P; Randall L; Whatmore AM
    J Microbiol Methods; 2014 Oct; 105():16-21. PubMed ID: 25014253
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Comparison of identification systems for psychrotrophic bacteria isolated from raw bovine milk.
    Vithanage NR; Yeager TR; Jadhav SR; Palombo EA; Datta N
    Int J Food Microbiol; 2014 Oct; 189():26-38. PubMed ID: 25113043
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Comparison of iSeq and MiSeq as the two platforms for 16S rRNA sequencing in the study of the gut of rat microbiome.
    Salamon D; Zapała B; Krawczyk A; Potasiewicz A; Nikiforuk A; Stój A; Gosiewski T
    Appl Microbiol Biotechnol; 2022 Nov; 106(22):7671-7681. PubMed ID: 36322250
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Evaluation of matrix-assisted laser desorption ionization-time-of-flight mass spectrometry in comparison to 16S rRNA gene sequencing for species identification of nonfermenting bacteria.
    Mellmann A; Cloud J; Maier T; Keckevoet U; Ramminger I; Iwen P; Dunn J; Hall G; Wilson D; Lasala P; Kostrzewa M; Harmsen D
    J Clin Microbiol; 2008 Jun; 46(6):1946-54. PubMed ID: 18400920
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 8.