121 related articles for article (PubMed ID: 38780930)
21. Comparison of functional properties of mammalian DNA polymerase lambda and DNA polymerase beta in reactions of DNA synthesis related to DNA repair.
Lebedeva NA; Rechkunova NI; Dezhurov SV; Khodyreva SN; Favre A; Blanco L; Lavrik OI
Biochim Biophys Acta; 2005 Aug; 1751(2):150-8. PubMed ID: 15979954
[TBL] [Abstract][Full Text] [Related]
22. Transitions in DNA polymerase β μs-ms dynamics related to substrate binding and catalysis.
DeRose EF; Kirby TW; Mueller GA; Beard WA; Wilson SH; London RE
Nucleic Acids Res; 2018 Aug; 46(14):7309-7322. PubMed ID: 29917149
[TBL] [Abstract][Full Text] [Related]
23. DNA polymerase beta: contributions of template-positioning and dNTP triphosphate-binding residues to catalysis and fidelity.
Kraynov VS; Showalter AK; Liu J; Zhong X; Tsai MD
Biochemistry; 2000 Dec; 39(51):16008-15. PubMed ID: 11123928
[TBL] [Abstract][Full Text] [Related]
24. Hinge residue I174 is critical for proper dNTP selection by DNA polymerase beta.
Yamtich J; Starcevic D; Lauper J; Smith E; Shi I; Rangarajan S; Jaeger J; Sweasy JB
Biochemistry; 2010 Mar; 49(11):2326-34. PubMed ID: 20108981
[TBL] [Abstract][Full Text] [Related]
25. Structural basis for the D-stereoselectivity of human DNA polymerase β.
Vyas R; Reed AJ; Raper AT; Zahurancik WJ; Wallenmeyer PC; Suo Z
Nucleic Acids Res; 2017 Jun; 45(10):6228-6237. PubMed ID: 28402499
[TBL] [Abstract][Full Text] [Related]
26. Substrate-dependent millisecond domain motions in DNA polymerase β.
Berlow RB; Swain M; Dalal S; Sweasy JB; Loria JP
J Mol Biol; 2012 Jun; 419(3-4):171-82. PubMed ID: 22446382
[TBL] [Abstract][Full Text] [Related]
27. The E295K cancer variant of human polymerase β favors the mismatch conformational pathway during nucleotide selection.
Eckenroth BE; Towle-Weicksel JB; Sweasy JB; Doublié S
J Biol Chem; 2013 Nov; 288(48):34850-60. PubMed ID: 24133209
[TBL] [Abstract][Full Text] [Related]
28. Dynamic characterization of a DNA repair enzyme: NMR studies of [methyl-13C]methionine-labeled DNA polymerase beta.
Bose-Basu B; DeRose EF; Kirby TW; Mueller GA; Beard WA; Wilson SH; London RE
Biochemistry; 2004 Jul; 43(28):8911-22. PubMed ID: 15248749
[TBL] [Abstract][Full Text] [Related]
29. Unfavorable electrostatic and steric interactions in DNA polymerase β E295K mutant interfere with the enzyme's pathway.
Li Y; Gridley CL; Jaeger J; Sweasy JB; Schlick T
J Am Chem Soc; 2012 Jun; 134(24):9999-10010. PubMed ID: 22651551
[TBL] [Abstract][Full Text] [Related]
30. In silico evidence for DNA polymerase-beta's substrate-induced conformational change.
Arora K; Schlick T
Biophys J; 2004 Nov; 87(5):3088-99. PubMed ID: 15507687
[TBL] [Abstract][Full Text] [Related]
31. A triad interaction in the fingers subdomain of DNA polymerase beta controls polymerase activity.
Murphy DL; Jaeger J; Sweasy JB
J Am Chem Soc; 2011 Apr; 133(16):6279-87. PubMed ID: 21452873
[TBL] [Abstract][Full Text] [Related]
32. Insight into the catalytic mechanism of DNA polymerase beta: structures of intermediate complexes.
Arndt JW; Gong W; Zhong X; Showalter AK; Liu J; Dunlap CA; Lin Z; Paxson C; Tsai MD; Chan MK
Biochemistry; 2001 May; 40(18):5368-75. PubMed ID: 11330999
[TBL] [Abstract][Full Text] [Related]
33. Effect of DNA polymerase beta loop variants on discrimination of O6-methyldeoxyguanosine modification present in the nucleotide versus template substrate.
Hamid S; Eckert KA
Biochemistry; 2005 Aug; 44(30):10378-87. PubMed ID: 16042415
[TBL] [Abstract][Full Text] [Related]
34. Crystal structures of human DNA polymerase beta complexed with DNA: implications for catalytic mechanism, processivity, and fidelity.
Pelletier H; Sawaya MR; Wolfle W; Wilson SH; Kraut J
Biochemistry; 1996 Oct; 35(39):12742-61. PubMed ID: 8841118
[TBL] [Abstract][Full Text] [Related]
35. The Asp285 variant of DNA polymerase beta extends mispaired primer termini via increased nucleotide binding.
Murphy DL; Kosa J; Jaeger J; Sweasy JB
Biochemistry; 2008 Aug; 47(31):8048-57. PubMed ID: 18616290
[TBL] [Abstract][Full Text] [Related]
36. Transition state in DNA polymerase β catalysis: rate-limiting chemistry altered by base-pair configuration.
Oertell K; Chamberlain BT; Wu Y; Ferri E; Kashemirov BA; Beard WA; Wilson SH; McKenna CE; Goodman MF
Biochemistry; 2014 Mar; 53(11):1842-8. PubMed ID: 24580380
[TBL] [Abstract][Full Text] [Related]
37. Regulation of DNA repair fidelity by molecular checkpoints: "gates" in DNA polymerase beta's substrate selection.
Radhakrishnan R; Arora K; Wang Y; Beard WA; Wilson SH; Schlick T
Biochemistry; 2006 Dec; 45(51):15142-56. PubMed ID: 17176036
[TBL] [Abstract][Full Text] [Related]
38. Probing the Flexibility of the Catalytic Nucleophile in the Lyase Catalytic Pocket of Human DNA Polymerase β with Unnatural Lysine Analogues.
Daskalova SM; Bhattacharya C; Dedkova LM; Hecht SM
Biochemistry; 2017 Jan; 56(3):500-513. PubMed ID: 28005340
[TBL] [Abstract][Full Text] [Related]
39. A DNA polymerase beta mutator mutant with reduced nucleotide discrimination and increased protein stability.
Shah AM; Conn DA; Li SX; Capaldi A; Jäger J; Sweasy JB
Biochemistry; 2001 Sep; 40(38):11372-81. PubMed ID: 11560485
[TBL] [Abstract][Full Text] [Related]
40. Identification of critical residues for the tight binding of both correct and incorrect nucleotides to human DNA polymerase λ.
Brown JA; Pack LR; Sherrer SM; Kshetry AK; Newmister SA; Fowler JD; Taylor JS; Suo Z
J Mol Biol; 2010 Nov; 403(4):505-15. PubMed ID: 20851705
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]