169 related articles for article (PubMed ID: 38812546)
21. Identification of a tumour immune barrier in the HCC microenvironment that determines the efficacy of immunotherapy.
Liu Y; Xun Z; Ma K; Liang S; Li X; Zhou S; Sun L; Liu Y; Du Y; Guo X; Cui T; Zhou H; Wang J; Yin D; Song R; Zhang S; Cai W; Meng F; Guo H; Zhang B; Yang D; Bao R; Hu Q; Wang J; Ye Y; Liu L
J Hepatol; 2023 Apr; 78(4):770-782. PubMed ID: 36708811
[TBL] [Abstract][Full Text] [Related]
22. TIMEx: tumor-immune microenvironment deconvolution web-portal for bulk transcriptomics using pan-cancer scRNA-seq signatures.
Xie M; Lee K; Lockhart JH; Cukras SD; Carvajal R; Beg AA; Flores ER; Teng M; Chung CH; Tan AC
Bioinformatics; 2021 Oct; 37(20):3681-3683. PubMed ID: 33901274
[TBL] [Abstract][Full Text] [Related]
23. Bulk brain tissue cell-type deconvolution with bias correction for single-nuclei RNA sequencing data using DeTREM.
O'Neill NK; Stein TD; Hu J; Rehman H; Campbell JD; Yajima M; Zhang X; Farrer LA
BMC Bioinformatics; 2023 Sep; 24(1):349. PubMed ID: 37726653
[TBL] [Abstract][Full Text] [Related]
24. Semi-deconvolution of bulk and single-cell RNA-seq data with application to metastatic progression in breast cancer.
Lei H; Guo XA; Tao Y; Ding K; Fu X; Oesterreich S; Lee AV; Schwartz R
Bioinformatics; 2022 Jun; 38(Suppl 1):i386-i394. PubMed ID: 35758822
[TBL] [Abstract][Full Text] [Related]
25. Integrating single-cell and spatial transcriptomics reveals endoplasmic reticulum stress-related CAF subpopulations associated with chordoma progression.
Zhang TL; Xia C; Zheng BW; Hu HH; Jiang LX; Escobar D; Zheng BY; Chen TD; Li J; Lv GH; Huang W; Yan YG; Zou MX
Neuro Oncol; 2024 Feb; 26(2):295-308. PubMed ID: 37772937
[TBL] [Abstract][Full Text] [Related]
26. Deep immunophenotyping at the single-cell level identifies a combination of anti-IL-17 and checkpoint blockade as an effective treatment in a preclinical model of data-guided personalized immunotherapy.
Nagaoka K; Shirai M; Taniguchi K; Hosoi A; Sun C; Kobayashi Y; Maejima K; Fujita M; Nakagawa H; Nomura S; Kakimi K
J Immunother Cancer; 2020 Oct; 8(2):. PubMed ID: 33093158
[TBL] [Abstract][Full Text] [Related]
27. Integrating Bulk and Single-Cell RNA Sequencing Reveals Heterogeneity, Tumor Microenvironment, and Immunotherapeutic Efficacy Based on Sialylation-Related Genes in Bladder Cancer.
Tan Z; Chen X; Zuo J; Fu S; Wang J; Wang H
J Inflamm Res; 2023; 16():3399-3417. PubMed ID: 37600224
[TBL] [Abstract][Full Text] [Related]
28. Single-cell RNA sequencing in breast cancer: Understanding tumor heterogeneity and paving roads to individualized therapy.
Ding S; Chen X; Shen K
Cancer Commun (Lond); 2020 Aug; 40(8):329-344. PubMed ID: 32654419
[TBL] [Abstract][Full Text] [Related]
29. Deciphering Treg cell roles in esophageal squamous cell carcinoma: a comprehensive prognostic and immunotherapeutic analysis.
Zhang P; Dong S; Sun W; Zhong W; Xiong J; Gong X; Li J; Lin H; Zhuang Y
Front Mol Biosci; 2023; 10():1277530. PubMed ID: 37842637
[No Abstract] [Full Text] [Related]
30. Different Glucose Metabolic Features According to Cancer and Immune Cells in the Tumor Microenvironment.
Choi H; Na KJ
Front Oncol; 2021; 11():769393. PubMed ID: 34966676
[TBL] [Abstract][Full Text] [Related]
31. Clustering-independent estimation of cell abundances in bulk tissues using single-cell RNA-seq data.
Aubin RG; Montelongo J; Hu R; Camara PG
bioRxiv; 2023 Feb; ():. PubMed ID: 36798206
[TBL] [Abstract][Full Text] [Related]
32. HArmonized single-cell RNA-seq Cell type Assisted Deconvolution (HASCAD).
Chiu YJ; Ni CE; Huang YH
BMC Med Genomics; 2023 Oct; 16(Suppl 2):272. PubMed ID: 37907883
[TBL] [Abstract][Full Text] [Related]
33. The heterogeneity of tumour-associated macrophages contributes to the clinical outcomes and indications for immune checkpoint blockade in colorectal cancer patients.
Tang J; Ming L; Qin F; Qin Y; Wang D; Huang L; Cao Y; Huang Z; Yin Y
Immunobiology; 2024 May; 229(3):152805. PubMed ID: 38669865
[TBL] [Abstract][Full Text] [Related]
34. Targeting nucleotide metabolic pathways in colorectal cancer by integrating scRNA-seq, spatial transcriptome, and bulk RNA-seq data.
Zhao S; Zhang P; Niu S; Xie J; Liu Y; Liu Y; Zhao N; Cheng C; Lu P
Funct Integr Genomics; 2024 Apr; 24(2):72. PubMed ID: 38594466
[TBL] [Abstract][Full Text] [Related]
35. CDSeqR: fast complete deconvolution for gene expression data from bulk tissues.
Kang K; Huang C; Li Y; Umbach DM; Li L
BMC Bioinformatics; 2021 May; 22(1):262. PubMed ID: 34030626
[TBL] [Abstract][Full Text] [Related]
36. iBRIDGE: A Data Integration Method to Identify Inflamed Tumors from Single-cell RNA-Seq Data and Differentiate Cell Type-Specific Markers of Immune-Cell Infiltration.
Turan T; Kongpachith S; Halliwill K; McLaughlin RT; Binnewies M; Reddy D; Zhao X; Mathew R; Ye S; Jacob HJ; Samayoa J
Cancer Immunol Res; 2023 Jun; 11(6):732-746. PubMed ID: 37023414
[TBL] [Abstract][Full Text] [Related]
37. Single-cell RNA-sequencing uncovers the dynamic changes of tumour immune microenvironment in advanced lung adenocarcinoma.
Lu H; Qian J; Cheng L; Shen Y; Chu T; Zhao C
BMJ Open Respir Res; 2023 Dec; 10(1):. PubMed ID: 38081768
[TBL] [Abstract][Full Text] [Related]
38. Integrated analysis of single-cell RNA-seq and bulk RNA-seq reveals immune suppression subtypes and establishes a novel signature for determining the prognosis in lung adenocarcinoma.
Mao S; Wang Y; Chao N; Zeng L; Zhang L
Cell Oncol (Dordr); 2024 Apr; ():. PubMed ID: 38616208
[TBL] [Abstract][Full Text] [Related]
39. Omnibus and robust deconvolution scheme for bulk RNA sequencing data integrating multiple single-cell reference sets and prior biological knowledge.
Chen C; Leung YY; Ionita M; Wang LS; Li M
Bioinformatics; 2022 Sep; 38(19):4530-4536. PubMed ID: 35980155
[TBL] [Abstract][Full Text] [Related]
40. Single-cell atlases link macrophages and CD8
Liang Y; Tan Y; Guan B; Guo B; Xia M; Li J; Shi Y; Yu Z; Zhang Q; Liu D; Yang X; Hao J; Gong Y; Shakeel M; Zhou L; Ci W; Li X
Theranostics; 2022; 12(18):7745-7759. PubMed ID: 36451860
[No Abstract] [Full Text] [Related]
[Previous] [Next] [New Search]