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2. Wastewater Genomic Surveillance Captures Early Detection of Omicron in Utah. Gupta P; Liao S; Ezekiel M; Novak N; Rossi A; LaCross N; Oakeson K; Rohrwasser A Microbiol Spectr; 2023 Jun; 11(3):e0039123. PubMed ID: 37154725 [TBL] [Abstract][Full Text] [Related]
3. Baseline Sequencing Surveillance of Public Clinical Testing, Hospitals, and Community Wastewater Reveals Rapid Emergence of SARS-CoV-2 Omicron Variant of Concern in Arizona, USA. Smith MF; Holland SC; Lee MB; Hu JC; Pham NC; Sullins RA; Holland LA; Mu T; Thomas AW; Fitch R; Driver EM; Halden RU; Villegas-Gold M; Sanders S; Krauss JL; Nordstrom L; Mulrow M; White M; Murugan V; Lim ES mBio; 2023 Feb; 14(1):e0310122. PubMed ID: 36622143 [TBL] [Abstract][Full Text] [Related]
4. Tracking SARS-CoV-2 variants of concern in wastewater: an assessment of nine computational tools using simulated genomic data. Sutcliffe SG; Kraemer SA; Ellmen I; Knapp JJ; Overton AK; Nash D; Nissimov JI; Charles TC; Dreifuss D; Topolsky I; Baykal PI; Fuhrmann L; Jablonski KP; Beerenwinkel N; Levy JI; Olabode AS; Becker DG; Gugan G; Brintnell E; Poon AFY; Valieris R; Drummond RD; Defelicibus A; Dias-Neto E; Rosales RA; Tojal da Silva I; Orfanou A; Psomopoulos F; Pechlivanis N; Pipes L; Chen Z; Baaijens JA; Baym M; Shapiro BJ Microb Genom; 2024 May; 10(5):. PubMed ID: 38785221 [TBL] [Abstract][Full Text] [Related]
5. Highly sensitive wastewater surveillance of SARS-CoV-2 variants by targeted next-generation amplicon sequencing provides early warning of incursion in Victoria, Australia. Merrett JE; Nolan M; Hartman L; John N; Flynn B; Baker L; Schang C; McCarthy D; Lister D; Cheng NN; Crosbie N; Poon R; Jex A Appl Environ Microbiol; 2024 Aug; 90(8):e0149723. PubMed ID: 39012098 [TBL] [Abstract][Full Text] [Related]
6. Systematic SARS-CoV-2 S-gene sequencing in wastewater samples enables early lineage detection and uncovers rare mutations in Portugal. Reis AC; Pinto D; Monteiro S; Santos R; Martins JV; Sousa A; Páscoa R; Lourinho R; Cunha MV Sci Total Environ; 2024 Apr; 921():170961. PubMed ID: 38367735 [TBL] [Abstract][Full Text] [Related]
7. Wastewater monitoring for detection of public health markers during the COVID-19 pandemic: Near-source monitoring of schools in England over an academic year. Hassard F; Vu M; Rahimzadeh S; Castro-Gutierrez V; Stanton I; Burczynska B; Wildeboer D; Baio G; Brown MR; Garelick H; Hofman J; Kasprzyk-Hordern B; Majeed A; Priest S; Denise H; Khalifa M; Bassano I; Wade MJ; Grimsley J; Lundy L; Singer AC; Di Cesare M PLoS One; 2023; 18(5):e0286259. PubMed ID: 37252922 [TBL] [Abstract][Full Text] [Related]
9. Genomic surveillance reveals early detection and transition of delta to omicron lineages of SARS-CoV-2 variants in wastewater treatment plants of Pune, India. Rajput V; Pramanik R; Malik V; Yadav R; Samson R; Kadam P; Bhalerao U; Tupekar M; Deshpande D; Shah P; Shashidhara LS; Boargaonkar R; Patil D; Kale S; Bhalerao A; Jain N; Kamble S; Dastager S; Karmodiya K; Dharne M Environ Sci Pollut Res Int; 2023 Dec; 30(56):118976-118988. PubMed ID: 37922087 [TBL] [Abstract][Full Text] [Related]
10. SARS-CoV-2 wastewater monitoring using a novel PCR-based method rapidly captured the Delta-to-Omicron ΒΑ.1 transition patterns in the absence of conventional surveillance evidence. Chassalevris T; Chaintoutis SC; Koureas M; Petala M; Moutou E; Beta C; Kyritsi M; Hadjichristodoulou C; Kostoglou M; Karapantsios T; Papadopoulos A; Papaioannou N; Dovas CI Sci Total Environ; 2022 Oct; 844():156932. PubMed ID: 35753493 [TBL] [Abstract][Full Text] [Related]
11. Wastewater surveillance allows early detection of SARS-CoV-2 omicron in North Rhine-Westphalia, Germany. Wilhelm A; Schoth J; Meinert-Berning C; Agrawal S; Bastian D; Orschler L; Ciesek S; Teichgräber B; Wintgens T; Lackner S; Weber FA; Widera M Sci Total Environ; 2022 Nov; 846():157375. PubMed ID: 35850355 [TBL] [Abstract][Full Text] [Related]
12. SARS-CoV-2 variant trends in Ireland: Wastewater-based epidemiology and clinical surveillance. Reynolds LJ; Gonzalez G; Sala-Comorera L; Martin NA; Byrne A; Fennema S; Holohan N; Kuntamukkula SR; Sarwar N; Nolan TM; Stephens JH; Whitty M; Bennett C; Luu Q; Morley U; Yandle Z; Dean J; Joyce E; O'Sullivan JJ; Cuddihy JM; McIntyre AM; Robinson EP; Dahly D; Fletcher NF; Carr M; De Gascun C; Meijer WG Sci Total Environ; 2022 Sep; 838(Pt 2):155828. PubMed ID: 35588817 [TBL] [Abstract][Full Text] [Related]
13. Molecular epidemiology of SARS-CoV-2 in Northern South Africa: wastewater surveillance from January 2021 to May 2022. Tambe LAM; Mathobo P; Matume ND; Munzhedzi M; Edokpayi JN; Viraragavan A; Glanzmann B; Tebit DM; Mavhandu-Ramarumo LG; Street R; Johnson R; Kinnear C; Bessong PO Front Public Health; 2023; 11():1309869. PubMed ID: 38174083 [TBL] [Abstract][Full Text] [Related]
14. Wastewater Surveillance for SARS-CoV-2 at Long-Term Care Facilities: Mixed Methods Evaluation. Keck JW; Lindner J; Liversedge M; Mijatovic B; Olsson C; Strike W; Noble A; Adatorwovor R; Lacy P; Smith T; Berry SM JMIR Public Health Surveill; 2023 Aug; 9():e44657. PubMed ID: 37643001 [TBL] [Abstract][Full Text] [Related]
15. Identification of SARS-CoV-2 variants using viral sequencing for the Centers for Disease Control and Prevention genomic surveillance program. Goswami C; Sheldon M; Bixby C; Keddache M; Bogdanowicz A; Wang Y; Schultz J; McDevitt J; LaPorta J; Kwon E; Buyske S; Garbolino D; Biloholowski G; Pastuszak A; Storella M; Bhalla A; Charlier-Rodriguez F; Hager R; Grimwood R; Nahas SA BMC Infect Dis; 2022 Apr; 22(1):404. PubMed ID: 35468749 [TBL] [Abstract][Full Text] [Related]
16. Long-term wastewater monitoring of SARS-CoV-2 viral loads and variants at the major international passenger hub Amsterdam Schiphol Airport: A valuable addition to COVID-19 surveillance. van der Drift AR; Haver A; Kloosterman A; van der Beek RFHJ; Nagelkerke E; Eggink D; Laros JFJ; Nrs C; van Dissel JT; de Roda Husman AM; Lodder WJ Sci Total Environ; 2024 Aug; 937():173535. PubMed ID: 38802021 [TBL] [Abstract][Full Text] [Related]
17. Wastewater sequencing reveals early cryptic SARS-CoV-2 variant transmission. Karthikeyan S; Levy JI; De Hoff P; Humphrey G; Birmingham A; Jepsen K; Farmer S; Tubb HM; Valles T; Tribelhorn CE; Tsai R; Aigner S; Sathe S; Moshiri N; Henson B; Mark AM; Hakim A; Baer NA; Barber T; Belda-Ferre P; Chacón M; Cheung W; Cresini ES; Eisner ER; Lastrella AL; Lawrence ES; Marotz CA; Ngo TT; Ostrander T; Plascencia A; Salido RA; Seaver P; Smoot EW; McDonald D; Neuhard RM; Scioscia AL; Satterlund AM; Simmons EH; Abelman DB; Brenner D; Bruner JC; Buckley A; Ellison M; Gattas J; Gonias SL; Hale M; Hawkins F; Ikeda L; Jhaveri H; Johnson T; Kellen V; Kremer B; Matthews G; McLawhon RW; Ouillet P; Park D; Pradenas A; Reed S; Riggs L; Sanders A; Sollenberger B; Song A; White B; Winbush T; Aceves CM; Anderson C; Gangavarapu K; Hufbauer E; Kurzban E; Lee J; Matteson NL; Parker E; Perkins SA; Ramesh KS; Robles-Sikisaka R; Schwab MA; Spencer E; Wohl S; Nicholson L; McHardy IH; Dimmock DP; Hobbs CA; Bakhtar O; Harding A; Mendoza A; Bolze A; Becker D; Cirulli ET; Isaksson M; Schiabor Barrett KM; Washington NL; Malone JD; Schafer AM; Gurfield N; Stous S; Fielding-Miller R; Garfein RS; Gaines T; Anderson C; Martin NK; Schooley R; Austin B; MacCannell DR; Kingsmore SF; Lee W; Shah S; McDonald E; Yu AT; Zeller M; Fisch KM; Longhurst C; Maysent P; Pride D; Khosla PK; Laurent LC; Yeo GW; Andersen KG; Knight R Nature; 2022 Sep; 609(7925):101-108. PubMed ID: 35798029 [TBL] [Abstract][Full Text] [Related]
18. Rapid and extensive SARS-CoV-2 Omicron variant infection wave revealed by wastewater surveillance in Shenzhen following the lifting of a strict COVID-19 strategy. Li Y; Du C; Lv Z; Wang F; Zhou L; Peng Y; Li W; Fu Y; Song J; Jia C; Zhang X; Liu M; Wang Z; Liu B; Yan S; Yang Y; Li X; Zhang Y; Yuan J; Xu S; Chen M; Shi X; Peng B; Chen Q; Qiu Y; Wu S; Jiang M; Chen M; Tang J; Wang L; Hu L; Wei B; Xia Y; Ji JS; Wan C; Lu H; Zhang T; Zou X; Fu S; Hu Q Sci Total Environ; 2024 Nov; 949():175235. PubMed ID: 39102947 [TBL] [Abstract][Full Text] [Related]
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20. RNA Viromics of Southern California Wastewater and Detection of SARS-CoV-2 Single-Nucleotide Variants. Rothman JA; Loveless TB; Kapcia J; Adams ED; Steele JA; Zimmer-Faust AG; Langlois K; Wanless D; Griffith M; Mao L; Chokry J; Griffith JF; Whiteson KL Appl Environ Microbiol; 2021 Nov; 87(23):e0144821. PubMed ID: 34550753 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]