These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

122 related articles for article (PubMed ID: 38839373)

  • 41. Embryonic Stem Cells Exhibit mRNA Isoform Specific Translational Regulation.
    Wong QW; Vaz C; Lee QY; Zhao TY; Luo R; Archer SK; Preiss T; Tanavde V; Vardy LA
    PLoS One; 2016; 11(1):e0143235. PubMed ID: 26799392
    [TBL] [Abstract][Full Text] [Related]  

  • 42. Direct Nanopore Sequencing of mRNA Reveals Landscape of Transcript Isoforms in Apicomplexan Parasites.
    Lee VV; Judd LM; Jex AR; Holt KE; Tonkin CJ; Ralph SA
    mSystems; 2021 Mar; 6(2):. PubMed ID: 33688018
    [TBL] [Abstract][Full Text] [Related]  

  • 43. Full-length transcriptomic analysis in murine and human heart reveals diversity of PGC-1α promoters and isoforms regulated distinctly in myocardial ischemia and obesity.
    Oehler D; Spychala A; Gödecke A; Lang A; Gerdes N; Ruas J; Kelm M; Szendroedi J; Westenfeld R
    BMC Biol; 2022 Jul; 20(1):169. PubMed ID: 35907957
    [TBL] [Abstract][Full Text] [Related]  

  • 44. Long-read RNA sequencing identifies region- and sex-specific C57BL/6J mouse brain mRNA isoform expression and usage.
    Jones EF; Howton TC; Flanary VL; Clark AD; Lasseigne BN
    Mol Brain; 2024 Jun; 17(1):40. PubMed ID: 38902764
    [TBL] [Abstract][Full Text] [Related]  

  • 45. Integrative analysis of Iso-Seq and RNA-seq data reveals transcriptome complexity and differential isoform in skin tissues of different hair length Yak.
    Zhou X; Wu X; Pei C; He M; Chu M; Guo X; Liang C; Bao P; Yan P
    BMC Genomics; 2024 May; 25(1):498. PubMed ID: 38773419
    [TBL] [Abstract][Full Text] [Related]  

  • 46. Comprehensive characterization of single-cell full-length isoforms in human and mouse with long-read sequencing.
    Tian L; Jabbari JS; Thijssen R; Gouil Q; Amarasinghe SL; Voogd O; Kariyawasam H; Du MRM; Schuster J; Wang C; Su S; Dong X; Law CW; Lucattini A; Prawer YDJ; Collar-Fernández C; Chung JD; Naim T; Chan A; Ly CH; Lynch GS; Ryall JG; Anttila CJA; Peng H; Anderson MA; Flensburg C; Majewski I; Roberts AW; Huang DCS; Clark MB; Ritchie ME
    Genome Biol; 2021 Nov; 22(1):310. PubMed ID: 34763716
    [TBL] [Abstract][Full Text] [Related]  

  • 47. ClusTrast: a short read de novo transcript isoform assembler guided by clustered contigs.
    Westrin KJ; Kretzschmar WW; Emanuelsson O
    BMC Bioinformatics; 2024 Feb; 25(1):54. PubMed ID: 38302873
    [TBL] [Abstract][Full Text] [Related]  

  • 48. Long-read proteogenomics to connect disease-associated sQTLs to the protein isoform effectors of disease.
    Abood A; Mesner LD; Jeffery ED; Murali M; Lehe M; Saquing J; Farber CR; Sheynkman GM
    bioRxiv; 2023 Mar; ():. PubMed ID: 36993769
    [TBL] [Abstract][Full Text] [Related]  

  • 49. Sparse linear modeling of next-generation mRNA sequencing (RNA-Seq) data for isoform discovery and abundance estimation.
    Li JJ; Jiang CR; Brown JB; Huang H; Bickel PJ
    Proc Natl Acad Sci U S A; 2011 Dec; 108(50):19867-72. PubMed ID: 22135461
    [TBL] [Abstract][Full Text] [Related]  

  • 50. Polyribosomal RNA-Seq reveals the decreased complexity and diversity of the Arabidopsis translatome.
    Zhang X; Rosen BD; Tang H; Krishnakumar V; Town CD
    PLoS One; 2015; 10(2):e0117699. PubMed ID: 25706651
    [TBL] [Abstract][Full Text] [Related]  

  • 51. Identification of novel alternative splicing associated with mastitis disease in Holstein dairy cows using large gap read mapping.
    Asselstine V; Medrano JF; Cánovas A
    BMC Genomics; 2022 Mar; 23(1):222. PubMed ID: 35305573
    [TBL] [Abstract][Full Text] [Related]  

  • 52. NanoSINC-seq dissects the isoform diversity in subcellular compartments of single cells.
    Oguchi Y; Ozaki Y; Abdelmoez MN; Shintaku H
    Sci Adv; 2021 Apr; 7(15):. PubMed ID: 33827812
    [TBL] [Abstract][Full Text] [Related]  

  • 53. Transcript Profiling Using Long-Read Sequencing Technologies.
    Bayega A; Wang YC; Oikonomopoulos S; Djambazian H; Fahiminiya S; Ragoussis J
    Methods Mol Biol; 2018; 1783():121-147. PubMed ID: 29767360
    [TBL] [Abstract][Full Text] [Related]  

  • 54. Quantifying the benefit offered by transcript assembly with Scallop-LR on single-molecule long reads.
    Tung LH; Shao M; Kingsford C
    Genome Biol; 2019 Dec; 20(1):287. PubMed ID: 31849338
    [TBL] [Abstract][Full Text] [Related]  

  • 55. Methodologies for Transcript Profiling Using Long-Read Technologies.
    Oikonomopoulos S; Bayega A; Fahiminiya S; Djambazian H; Berube P; Ragoussis J
    Front Genet; 2020; 11():606. PubMed ID: 32733532
    [TBL] [Abstract][Full Text] [Related]  

  • 56. Characterization of 954 bovine full-CDS cDNA sequences.
    Harhay GP; Sonstegard TS; Keele JW; Heaton MP; Clawson ML; Snelling WM; Wiedmann RT; Van Tassell CP; Smith TP
    BMC Genomics; 2005 Nov; 6():166. PubMed ID: 16305752
    [TBL] [Abstract][Full Text] [Related]  

  • 57. Identification of alternatively spliced gene isoforms and novel noncoding RNAs by single-molecule long-read sequencing in
    Hu Z; Lyu T; Yan C; Wang Y; Ye N; Fan Z; Li X; Li J; Yin H
    RNA Biol; 2020 Jul; 17(7):966-976. PubMed ID: 32160106
    [TBL] [Abstract][Full Text] [Related]  

  • 58. Uncovering full-length transcript isoforms of sugarcane cultivar Khon Kaen 3 using single-molecule long-read sequencing.
    Piriyapongsa J; Kaewprommal P; Vaiwsri S; Anuntakarun S; Wirojsirasak W; Punpee P; Klomsa-Ard P; Shaw PJ; Pootakham W; Yoocha T; Sangsrakru D; Tangphatsornruang S; Tongsima S; Tragoonrung S
    PeerJ; 2018; 6():e5818. PubMed ID: 30397543
    [TBL] [Abstract][Full Text] [Related]  

  • 59. cloudrnaSPAdes: Isoform assembly using bulk barcoded RNA sequencing data.
    Meleshko D; Prjbelski AD; Raiko M; Tomescu AI; Tilgner H; Hajirasouliha I
    bioRxiv; 2023 Jul; ():. PubMed ID: 37546844
    [TBL] [Abstract][Full Text] [Related]  

  • 60. Knowledge-based reconstruction of mRNA transcripts with short sequencing reads for transcriptome research.
    Seok J; Xu W; Jiang H; Davis RW; Xiao W
    PLoS One; 2012; 7(2):e31440. PubMed ID: 22312447
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 7.