105 related articles for article (PubMed ID: 38863553)
1. Establishing an optimized ATAC-seq protocol for the maize.
Hsieh JA; Lin PY; Wang CT; Lee YJ; Chang P; Lu RJ; Chen PY; Wang CR
Front Plant Sci; 2024; 15():1370618. PubMed ID: 38863553
[TBL] [Abstract][Full Text] [Related]
2. Efficient chromatin accessibility mapping in situ by nucleosome-tethered tagmentation.
Henikoff S; Henikoff JG; Kaya-Okur HS; Ahmad K
Elife; 2020 Nov; 9():. PubMed ID: 33191916
[TBL] [Abstract][Full Text] [Related]
3. Optimization of ATAC-seq in wheat seedling roots using INTACT-isolated nuclei.
Debernardi JM; Burguener G; Bubb K; Liu Q; Queitsch C; Dubcovsky J
BMC Plant Biol; 2023 May; 23(1):270. PubMed ID: 37211599
[TBL] [Abstract][Full Text] [Related]
4. Mapping Genome-wide Accessible Chromatin in Primary Human T Lymphocytes by ATAC-Seq.
Grbesa I; Tannenbaum M; Sarusi-Portuguez A; Schwartz M; Hakim O
J Vis Exp; 2017 Nov; (129):. PubMed ID: 29155775
[TBL] [Abstract][Full Text] [Related]
5. Chromatin accessibility profiling by ATAC-seq.
Grandi FC; Modi H; Kampman L; Corces MR
Nat Protoc; 2022 Jun; 17(6):1518-1552. PubMed ID: 35478247
[TBL] [Abstract][Full Text] [Related]
6. Computational Analysis of Maize Enhancer Regulatory Elements Using ATAC-STARR-seq.
Marand AP
bioRxiv; 2023 Jan; ():. PubMed ID: 36711646
[TBL] [Abstract][Full Text] [Related]
7. Optimized assay for transposase-accessible chromatin by sequencing (ATAC-seq) library preparation from adult Drosophila melanogaster neurons.
Merrill CB; Pabon MA; Montgomery AB; Rodan AR; Rothenfluh A
Sci Rep; 2022 Apr; 12(1):6043. PubMed ID: 35411004
[TBL] [Abstract][Full Text] [Related]
8. Mapping open chromatin by ATAC-seq in bread wheat.
Wang X; Chen C; He C; Chen D; Yan W
Front Plant Sci; 2022; 13():1074873. PubMed ID: 36466281
[TBL] [Abstract][Full Text] [Related]
9. Chromatin Accessibility Profiling and Data Analysis Using ATAC-seq in
Reeves GA; Singh PP; Brunet A
Cold Spring Harb Protoc; 2024 Mar; 2024(3):107747. PubMed ID: 37100469
[TBL] [Abstract][Full Text] [Related]
10. Adipocyte-Specific ATAC-Seq with Adipose Tissues Using Fluorescence-Activated Nucleus Sorting.
Kim K; Taleb S; So J; Wann J; Cheol Roh H
J Vis Exp; 2023 Mar; (193):. PubMed ID: 37010301
[TBL] [Abstract][Full Text] [Related]
11. Identification of Open Chromatin Regions in Plant Genomes Using ATAC-Seq.
Bajic M; Maher KA; Deal RB
Methods Mol Biol; 2018; 1675():183-201. PubMed ID: 29052193
[TBL] [Abstract][Full Text] [Related]
12. Hydrop enables droplet-based single-cell ATAC-seq and single-cell RNA-seq using dissolvable hydrogel beads.
De Rop FV; Ismail JN; Bravo González-Blas C; Hulselmans GJ; Flerin CC; Janssens J; Theunis K; Christiaens VM; Wouters J; Marcassa G; de Wit J; Poovathingal S; Aerts S
Elife; 2022 Feb; 11():. PubMed ID: 35195064
[TBL] [Abstract][Full Text] [Related]
13. ATAC-Seq Analysis of Accessible Chromatin: From Experimental Steps to Data Analysis.
Tatara M; Ikeda T; Namekawa SH; Maezawa S
Methods Mol Biol; 2023; 2577():65-81. PubMed ID: 36173566
[TBL] [Abstract][Full Text] [Related]
14. Integration of ATAC-seq and RNA-seq analysis identifies key genes affecting intramuscular fat content in pigs.
Xu Z; Wu J; Zhou J; Zhang Y; Qiao M; Sun H; Li Z; Li L; Chen N; Oyelami FO; Peng X; Mei S
Front Nutr; 2022; 9():1016956. PubMed ID: 36276837
[TBL] [Abstract][Full Text] [Related]
15. [Advances in assay for transposase-accessible chromatin with high-throughput sequencing].
Wu J; Quan JP; Ye Y; Wu ZF; Yang J; Yang M; Zheng EQ
Yi Chuan; 2020 Apr; 42(4):333-346. PubMed ID: 32312702
[TBL] [Abstract][Full Text] [Related]
16. Profiling chromatin regulatory landscape: insights into the development of ChIP-seq and ATAC-seq.
Ma S; Zhang Y
Mol Biomed; 2020; 1(1):9. PubMed ID: 34765994
[TBL] [Abstract][Full Text] [Related]
17. Analytical Approaches for ATAC-seq Data Analysis.
Smith JP; Sheffield NC
Curr Protoc Hum Genet; 2020 Jun; 106(1):e101. PubMed ID: 32543102
[TBL] [Abstract][Full Text] [Related]
18. Cell type-specific chromatin accessibility analysis in the mouse and human brain.
Rocks D; Jaric I; Tesfa L; Greally JM; Suzuki M; Kundakovic M
Epigenetics; 2022; 17(2):202-219. PubMed ID: 33775205
[TBL] [Abstract][Full Text] [Related]
19. ATACgraph: Profiling Genome-Wide Chromatin Accessibility From ATAC-seq.
Lu RJ; Liu YT; Huang CW; Yen MR; Lin CY; Chen PY
Front Genet; 2020; 11():618478. PubMed ID: 33584814
[TBL] [Abstract][Full Text] [Related]
20. An ATAC-seq atlas of chromatin accessibility in mouse tissues.
Liu C; Wang M; Wei X; Wu L; Xu J; Dai X; Xia J; Cheng M; Yuan Y; Zhang P; Li J; Feng T; Chen A; Zhang W; Chen F; Shang Z; Zhang X; Peters BA; Liu L
Sci Data; 2019 May; 6(1):65. PubMed ID: 31110271
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]