131 related articles for article (PubMed ID: 38870521)
41. Align: a C++ class library and web server for rapid sequence alignment prototyping.
Tosatto SC; Albiero A; Mantovan A; Ferrari C; Bindewald E; Toppo S
Curr Drug Discov Technol; 2006 Sep; 3(3):167-73. PubMed ID: 17311562
[TBL] [Abstract][Full Text] [Related]
42. Insights from 20 years of the Molecule of the Month.
Goodsell DS; Zardecki C; Berman HM; Burley SK
Biochem Mol Biol Educ; 2020 Jul; 48(4):350-355. PubMed ID: 32558264
[TBL] [Abstract][Full Text] [Related]
43. The RCSB Protein Data Bank: a redesigned query system and relational database based on the mmCIF schema.
Deshpande N; Addess KJ; Bluhm WF; Merino-Ott JC; Townsend-Merino W; Zhang Q; Knezevich C; Xie L; Chen L; Feng Z; Green RK; Flippen-Anderson JL; Westbrook J; Berman HM; Bourne PE
Nucleic Acids Res; 2005 Jan; 33(Database issue):D233-7. PubMed ID: 15608185
[TBL] [Abstract][Full Text] [Related]
44. Look-Align: an interactive web-based multiple sequence alignment viewer with polymorphism analysis support.
Canaran P; Stein L; Ware D
Bioinformatics; 2006 Apr; 22(7):885-6. PubMed ID: 16473875
[TBL] [Abstract][Full Text] [Related]
45. Using the tools and resources of the RCSB protein data bank.
Dutta S; M Berman H; F Bluhm W
Curr Protoc Bioinformatics; 2007 Dec; Chapter 1():1.9.1-1.9.24. PubMed ID: 18428680
[TBL] [Abstract][Full Text] [Related]
46. RCSB Protein Data Bank 1D tools and services.
Segura J; Rose Y; Westbrook J; Burley SK; Duarte JM
Bioinformatics; 2021 Apr; 36(22-23):5526-5527. PubMed ID: 33313665
[TBL] [Abstract][Full Text] [Related]
47. Structure alignment based on coding of local geometric measures.
Chang PL; Rinne AW; Dewey TG
BMC Bioinformatics; 2006 Jul; 7():346. PubMed ID: 16842622
[TBL] [Abstract][Full Text] [Related]
48. Using the Tools and Resources of the RCSB Protein Data Bank.
Costanzo LD; Ghosh S; Zardecki C; Burley SK
Curr Protoc Bioinformatics; 2016 Sep; 55():1.9.1-1.9.35. PubMed ID: 27603019
[TBL] [Abstract][Full Text] [Related]
49. Efficient protein alignment algorithm for protein search.
Lu Z; Zhao Z; Fu B
BMC Bioinformatics; 2010 Jan; 11 Suppl 1(Suppl 1):S34. PubMed ID: 20122207
[TBL] [Abstract][Full Text] [Related]
50. MATRAS: A program for protein 3D structure comparison.
Kawabata T
Nucleic Acids Res; 2003 Jul; 31(13):3367-9. PubMed ID: 12824329
[TBL] [Abstract][Full Text] [Related]
51. FATCAT: a web server for flexible structure comparison and structure similarity searching.
Ye Y; Godzik A
Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W582-5. PubMed ID: 15215455
[TBL] [Abstract][Full Text] [Related]
52. PDB explorer -- a web based algorithm for protein annotation viewer and 3D visualization.
Nayarisseri A; Shardiwal RK; Yadav M; Kanungo N; Singh P; Shah P; Ahmed S
Interdiscip Sci; 2014 Dec; 6(4):279-84. PubMed ID: 25118648
[TBL] [Abstract][Full Text] [Related]
53. PDBms-An online tool for PDB file splitting and interactive molecular visualization.
Ashok Kumar T
Interdiscip Sci; 2023 Mar; 15(1):146-153. PubMed ID: 36180812
[TBL] [Abstract][Full Text] [Related]
54. SALIGN: a web server for alignment of multiple protein sequences and structures.
Braberg H; Webb BM; Tjioe E; Pieper U; Sali A; Madhusudhan MS
Bioinformatics; 2012 Aug; 28(15):2072-3. PubMed ID: 22618536
[TBL] [Abstract][Full Text] [Related]
55. PDB-Explorer: a web-based interactive map of the protein data bank in shape space.
Jin X; Awale M; Zasso M; Kostro D; Patiny L; Reymond JL
BMC Bioinformatics; 2015 Oct; 16():339. PubMed ID: 26493835
[TBL] [Abstract][Full Text] [Related]
56. From analysis of protein structural alignments toward a novel approach to align protein sequences.
Sunyaev SR; Bogopolsky GA; Oleynikova NV; Vlasov PK; Finkelstein AV; Roytberg MA
Proteins; 2004 Feb; 54(3):569-82. PubMed ID: 14748004
[TBL] [Abstract][Full Text] [Related]
57. CAB-Align: A Flexible Protein Structure Alignment Method Based on the Residue-Residue Contact Area.
Terashi G; Takeda-Shitaka M
PLoS One; 2015; 10(10):e0141440. PubMed ID: 26502070
[TBL] [Abstract][Full Text] [Related]
58. SBAL: a practical tool to generate and edit structure-based amino acid sequence alignments.
Wang CK; Broder U; Weeratunga SK; Gasser RB; Loukas A; Hofmann A
Bioinformatics; 2012 Apr; 28(7):1026-7. PubMed ID: 22332239
[TBL] [Abstract][Full Text] [Related]
59. 3DPatch: fast 3D structure visualization with residue conservation.
Jakubec D; Vondrášek J; Finn RD
Bioinformatics; 2019 Jan; 35(2):332-334. PubMed ID: 29931189
[TBL] [Abstract][Full Text] [Related]
60. Alignment-Annotator web server: rendering and annotating sequence alignments.
Gille C; Fähling M; Weyand B; Wieland T; Gille A
Nucleic Acids Res; 2014 Jul; 42(Web Server issue):W3-6. PubMed ID: 24813445
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]