These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

120 related articles for article (PubMed ID: 38898394)

  • 41. COSMOS: Python library for massively parallel workflows.
    Gafni E; Luquette LJ; Lancaster AK; Hawkins JB; Jung JY; Souilmi Y; Wall DP; Tonellato PJ
    Bioinformatics; 2014 Oct; 30(20):2956-8. PubMed ID: 24982428
    [TBL] [Abstract][Full Text] [Related]  

  • 42. NCBI Genome Workbench: Desktop Software for Comparative Genomics, Visualization, and GenBank Data Submission.
    Kuznetsov A; Bollin CJ
    Methods Mol Biol; 2021; 2231():261-295. PubMed ID: 33289898
    [TBL] [Abstract][Full Text] [Related]  

  • 43. Alkahest NuclearBLAST : a user-friendly BLAST management and analysis system.
    Diener SE; Houfek TD; Kalat SE; Windham DE; Burke M; Opperman C; Dean RA
    BMC Bioinformatics; 2005 Jun; 6():147. PubMed ID: 15958161
    [TBL] [Abstract][Full Text] [Related]  

  • 44. RRBSMAP: a fast, accurate and user-friendly alignment tool for reduced representation bisulfite sequencing.
    Xi Y; Bock C; Müller F; Sun D; Meissner A; Li W
    Bioinformatics; 2012 Feb; 28(3):430-2. PubMed ID: 22155871
    [TBL] [Abstract][Full Text] [Related]  

  • 45. DNA Features Viewer: a sequence annotation formatting and plotting library for Python.
    Zulkower V; Rosser S
    Bioinformatics; 2020 Aug; 36(15):4350-4352. PubMed ID: 32637988
    [TBL] [Abstract][Full Text] [Related]  

  • 46. Fast and accurate long-read alignment with Burrows-Wheeler transform.
    Li H; Durbin R
    Bioinformatics; 2010 Mar; 26(5):589-95. PubMed ID: 20080505
    [TBL] [Abstract][Full Text] [Related]  

  • 47. A high level interface to SCOP and ASTRAL implemented in python.
    Casbon JA; Crooks GE; Saqi MA
    BMC Bioinformatics; 2006 Jan; 7():10. PubMed ID: 16403221
    [TBL] [Abstract][Full Text] [Related]  

  • 48. Biskit--a software platform for structural bioinformatics.
    Grünberg R; Nilges M; Leckner J
    Bioinformatics; 2007 Mar; 23(6):769-70. PubMed ID: 17237072
    [TBL] [Abstract][Full Text] [Related]  

  • 49. ADEPT: a domain independent sequence alignment strategy for gpu architectures.
    Awan MG; Deslippe J; Buluc A; Selvitopi O; Hofmeyr S; Oliker L; Yelick K
    BMC Bioinformatics; 2020 Sep; 21(1):406. PubMed ID: 32933482
    [TBL] [Abstract][Full Text] [Related]  

  • 50. OrthoSelect: a protocol for selecting orthologous groups in phylogenomics.
    Schreiber F; Pick K; Erpenbeck D; Wörheide G; Morgenstern B
    BMC Bioinformatics; 2009 Jul; 10():219. PubMed ID: 19607672
    [TBL] [Abstract][Full Text] [Related]  

  • 51. BioShell 3.0: Library for Processing Structural Biology Data.
    Macnar JM; Szulc NA; Kryś JD; Badaczewska-Dawid AE; Gront D
    Biomolecules; 2020 Mar; 10(3):. PubMed ID: 32188163
    [TBL] [Abstract][Full Text] [Related]  

  • 52. Optimizing performance of GATK workflows using Apache Arrow In-Memory data framework.
    Ahmad T; Ahmed N; Al-Ars Z; Hofstee HP
    BMC Genomics; 2020 Nov; 21(Suppl 10):683. PubMed ID: 33208101
    [TBL] [Abstract][Full Text] [Related]  

  • 53. Parasail: SIMD C library for global, semi-global, and local pairwise sequence alignments.
    Daily J
    BMC Bioinformatics; 2016 Feb; 17():81. PubMed ID: 26864881
    [TBL] [Abstract][Full Text] [Related]  

  • 54. Quickly finding orthologs as reciprocal best hits with BLAT, LAST, and UBLAST: how much do we miss?
    Ward N; Moreno-Hagelsieb G
    PLoS One; 2014; 9(7):e101850. PubMed ID: 25013894
    [TBL] [Abstract][Full Text] [Related]  

  • 55. EMMA: an efficient massive mapping algorithm using improved approximate mapping filtering.
    Zhang X; Cao ZW; Lin ZX; Wang QK; Li YX
    Acta Biochim Biophys Sin (Shanghai); 2006 Dec; 38(12):857-64. PubMed ID: 17151779
    [TBL] [Abstract][Full Text] [Related]  

  • 56. BuddySuite: Command-Line Toolkits for Manipulating Sequences, Alignments, and Phylogenetic Trees.
    Bond SR; Keat KE; Barreira SN; Baxevanis AD
    Mol Biol Evol; 2017 Jun; 34(6):1543-1546. PubMed ID: 28333216
    [TBL] [Abstract][Full Text] [Related]  

  • 57. A lightweight, flow-based toolkit for parallel and distributed bioinformatics pipelines.
    Cieślik M; Mura C
    BMC Bioinformatics; 2011 Feb; 12():61. PubMed ID: 21352538
    [TBL] [Abstract][Full Text] [Related]  

  • 58. DolphinNext: a distributed data processing platform for high throughput genomics.
    Yukselen O; Turkyilmaz O; Ozturk AR; Garber M; Kucukural A
    BMC Genomics; 2020 Apr; 21(1):310. PubMed ID: 32306927
    [TBL] [Abstract][Full Text] [Related]  

  • 59. A Python-based programming language for high-performance computational genomics.
    Shajii A; Numanagić I; Leighton AT; Greenyer H; Amarasinghe S; Berger B
    Nat Biotechnol; 2021 Sep; 39(9):1062-1064. PubMed ID: 34282326
    [No Abstract]   [Full Text] [Related]  

  • 60. A fast and efficient python library for interfacing with the Biological Magnetic Resonance Data Bank.
    Smelter A; Astra M; Moseley HN
    BMC Bioinformatics; 2017 Mar; 18(1):175. PubMed ID: 28302053
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 6.