132 related articles for article (PubMed ID: 38900631)
1. Protocol for multimodal profiling of human kidneys with simultaneous high-throughput ATAC and RNA expression with sequencing.
Li H; Humphreys BD
STAR Protoc; 2024 Jun; 5(3):103049. PubMed ID: 38900631
[TBL] [Abstract][Full Text] [Related]
2. Efficient chromatin accessibility mapping in situ by nucleosome-tethered tagmentation.
Henikoff S; Henikoff JG; Kaya-Okur HS; Ahmad K
Elife; 2020 Nov; 9():. PubMed ID: 33191916
[TBL] [Abstract][Full Text] [Related]
3. Protocol for Bulk-ATAC sequencing in head and neck squamous cell carcinoma.
Chen N; Vohra M; Saladi SV
STAR Protoc; 2023 Apr; 4(2):102233. PubMed ID: 37071527
[TBL] [Abstract][Full Text] [Related]
4. Low-input ATAC&mRNA-seq protocol for simultaneous profiling of chromatin accessibility and gene expression.
Li R; Grimm SA; Wade PA
STAR Protoc; 2021 Sep; 2(3):100764. PubMed ID: 34485936
[TBL] [Abstract][Full Text] [Related]
5. Analyzing genomic and epigenetic profiles in single cells by hybrid transposase (scGET-seq).
Cittaro D; Lazarević D; Tonon G; Giannese F
STAR Protoc; 2023 Mar; 4(2):102176. PubMed ID: 37000619
[TBL] [Abstract][Full Text] [Related]
6. Protocol for chromatin accessibility profiling of human endothelial cells cultured under fluid shear stress using ATAC-seq.
Raaz L; Mendez PL; Mundlos S; Knaus P; Jatzlau J
STAR Protoc; 2024 Mar; 5(1):102859. PubMed ID: 38329877
[TBL] [Abstract][Full Text] [Related]
7. Protocol for single-nucleus ATAC sequencing and bioinformatic analysis in frozen human brain tissue.
Shi Z; Das S; Morabito S; Miyoshi E; Swarup V
STAR Protoc; 2022 Sep; 3(3):101491. PubMed ID: 35755130
[TBL] [Abstract][Full Text] [Related]
8. ATAC-seq protocol for the profiling of chromatin accessibility of in situ fixed quiescent and activated muscle stem cells.
Dong A; Chan ITC; Cheung TH
STAR Protoc; 2023 Sep; 4(3):102376. PubMed ID: 37352103
[TBL] [Abstract][Full Text] [Related]
9. Mouse kidney nuclear isolation and library preparation for single-cell combinatorial indexing RNA sequencing.
Li H; Humphreys BD
STAR Protoc; 2022 Dec; 3(4):101904. PubMed ID: 36595916
[TBL] [Abstract][Full Text] [Related]
10. Hydrop enables droplet-based single-cell ATAC-seq and single-cell RNA-seq using dissolvable hydrogel beads.
De Rop FV; Ismail JN; Bravo González-Blas C; Hulselmans GJ; Flerin CC; Janssens J; Theunis K; Christiaens VM; Wouters J; Marcassa G; de Wit J; Poovathingal S; Aerts S
Elife; 2022 Feb; 11():. PubMed ID: 35195064
[TBL] [Abstract][Full Text] [Related]
11. Profiling single-cell chromatin accessibility in plants.
Marand AP; Zhang X; Nelson J; Braga Dos Reis PA; Schmitz RJ
STAR Protoc; 2021 Sep; 2(3):100737. PubMed ID: 34430912
[TBL] [Abstract][Full Text] [Related]
12. Chromatin accessibility profiling by ATAC-seq.
Grandi FC; Modi H; Kampman L; Corces MR
Nat Protoc; 2022 Jun; 17(6):1518-1552. PubMed ID: 35478247
[TBL] [Abstract][Full Text] [Related]
13. Protocol for assaying chromatin accessibility using ATAC-seq in plants.
Wang FX; Shang GD; Wu LY; Mai YX; Gao J; Xu ZG; Wang JW
STAR Protoc; 2021 Mar; 2(1):100289. PubMed ID: 33532736
[TBL] [Abstract][Full Text] [Related]
14. Spatially resolved epigenome sequencing via Tn5 transposition and deterministic DNA barcoding in tissue.
Farzad N; Enninful A; Bao S; Zhang D; Deng Y; Fan R
Nat Protoc; 2024 Jun; ():. PubMed ID: 38943021
[TBL] [Abstract][Full Text] [Related]
15. ATAC Sequencing Protocol For Cryopreserved Mammalian Cells.
Caravaca JM; Mehta M; Gowda S; Tran B
Bio Protoc; 2022 Jan; 12(2):e4294. PubMed ID: 35127984
[TBL] [Abstract][Full Text] [Related]
16. Protocol for single-cell ATAC sequencing using combinatorial indexing in mouse lung adenocarcinoma.
Del Priore I; Ma S; Strecker J; Jacks T; LaFave LM; Buenrostro JD
STAR Protoc; 2021 Jun; 2(2):100583. PubMed ID: 34142101
[TBL] [Abstract][Full Text] [Related]
17. Protocol for scChaRM-seq: Simultaneous profiling of gene expression, DNA methylation, and chromatin accessibility in single cells.
Yan R; Cheng X; Guo F
STAR Protoc; 2021 Dec; 2(4):100972. PubMed ID: 34849489
[TBL] [Abstract][Full Text] [Related]
18. FFPE-ATAC: A Highly Sensitive Method for Profiling Chromatin Accessibility in Formalin-Fixed Paraffin-Embedded Samples.
Yadav RP; Polavarapu VK; Xing P; Chen X
Curr Protoc; 2022 Aug; 2(8):e535. PubMed ID: 35994571
[TBL] [Abstract][Full Text] [Related]
19. Optimized protocol for assay for transposase-accessible chromatin by sequencing (ATAC-seq) from Drosophila melanogaster brain tissue.
Dhall JK; Kasturacharya N; Pandit A; Cp L
STAR Protoc; 2023 Apr; 4(2):102153. PubMed ID: 37074906
[TBL] [Abstract][Full Text] [Related]
20. Protocol for bulk and single-nuclei chromatin accessibility quantification in mouse liver tissue.
Korenfeld N; Toft NI; Dam TV; Charni-Natan M; Grøntved L; Goldstein I
STAR Protoc; 2023 Sep; 4(3):102462. PubMed ID: 37590150
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
