These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

118 related articles for article (PubMed ID: 38905083)

  • 1. SeedHit: A GPU Friendly Pre-Align Filtering Algorithm.
    Ju Z; Zhang J; Li X; Meng J; Wei Y
    IEEE/ACM Trans Comput Biol Bioinform; 2024 Jun; PP():. PubMed ID: 38905083
    [TBL] [Abstract][Full Text] [Related]  

  • 2. SneakySnake: a fast and accurate universal genome pre-alignment filter for CPUs, GPUs and FPGAs.
    Alser M; Shahroodi T; Gómez-Luna J; Alkan C; Mutlu O
    Bioinformatics; 2021 Apr; 36(22-23):5282-5290. PubMed ID: 33315064
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Accelerating BWA-MEM Read Mapping on GPUs.
    Pham M; Tu Y; Lv X
    ICS; 2023 Jun; 2023():155-166. PubMed ID: 37584044
    [TBL] [Abstract][Full Text] [Related]  

  • 4. A fast forward projection using multithreads for multirays on GPUs in medical image reconstruction.
    Chou CY; Chuo YY; Hung Y; Wang W
    Med Phys; 2011 Jul; 38(7):4052-65. PubMed ID: 21859004
    [TBL] [Abstract][Full Text] [Related]  

  • 5. GRIM-Filter: Fast seed location filtering in DNA read mapping using processing-in-memory technologies.
    Kim JS; Senol Cali D; Xin H; Lee D; Ghose S; Alser M; Hassan H; Ergin O; Alkan C; Mutlu O
    BMC Genomics; 2018 May; 19(Suppl 2):89. PubMed ID: 29764378
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Efficient methods for implementation of multi-level nonrigid mass-preserving image registration on GPUs and multi-threaded CPUs.
    Ellingwood ND; Yin Y; Smith M; Lin CL
    Comput Methods Programs Biomed; 2016 Apr; 127():290-300. PubMed ID: 26776541
    [TBL] [Abstract][Full Text] [Related]  

  • 7. WFA-GPU: gap-affine pairwise read-alignment using GPUs.
    Aguado-Puig Q; Doblas M; Matzoros C; Espinosa A; Moure JC; Marco-Sola S; Moreto M
    Bioinformatics; 2023 Dec; 39(12):. PubMed ID: 37975878
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Fast single individual haplotyping method using GPGPU.
    Na JC; Lee I; Rhee JK; Shin SY
    Comput Biol Med; 2019 Oct; 113():103421. PubMed ID: 31499396
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Accelerated Molecular Mechanical and Solvation Energetics on Multicore CPUs and Manycore GPUs.
    Cha D; Rand A; Zhang Q; Chowdhury RA; Tithi JJ; Bajaj C
    ACM BCB; 2015 Sep; 2015():222-231. PubMed ID: 32647834
    [TBL] [Abstract][Full Text] [Related]  

  • 10. GASAL2: a GPU accelerated sequence alignment library for high-throughput NGS data.
    Ahmed N; Lévy J; Ren S; Mushtaq H; Bertels K; Al-Ars Z
    BMC Bioinformatics; 2019 Oct; 20(1):520. PubMed ID: 31653208
    [TBL] [Abstract][Full Text] [Related]  

  • 11. GHOSTM: a GPU-accelerated homology search tool for metagenomics.
    Suzuki S; Ishida T; Kurokawa K; Akiyama Y
    PLoS One; 2012; 7(5):e36060. PubMed ID: 22574135
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A Hybrid CPU/GPU Pattern-Matching Algorithm for Deep Packet Inspection.
    Lee CL; Lin YS; Chen YC
    PLoS One; 2015; 10(10):e0139301. PubMed ID: 26437335
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Erratum: High-Throughput Identification of Resistance to Pseudomonas syringae pv. Tomato in Tomato using Seedling Flood Assay.
    J Vis Exp; 2023 Oct; (200):. PubMed ID: 37851522
    [TBL] [Abstract][Full Text] [Related]  

  • 14. ADEPT: a domain independent sequence alignment strategy for gpu architectures.
    Awan MG; Deslippe J; Buluc A; Selvitopi O; Hofmeyr S; Oliker L; Yelick K
    BMC Bioinformatics; 2020 Sep; 21(1):406. PubMed ID: 32933482
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Design of GPU Network-on-Chip for Real-Time Video Super-Resolution Reconstruction.
    Peng Z; Du J; Qiao Y
    Micromachines (Basel); 2023 May; 14(5):. PubMed ID: 37241678
    [TBL] [Abstract][Full Text] [Related]  

  • 16. H-BLAST: a fast protein sequence alignment toolkit on heterogeneous computers with GPUs.
    Ye W; Chen Y; Zhang Y; Xu Y
    Bioinformatics; 2017 Apr; 33(8):1130-1138. PubMed ID: 28087515
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Multi-GPU implementation of a VMAT treatment plan optimization algorithm.
    Tian Z; Peng F; Folkerts M; Tan J; Jia X; Jiang SB
    Med Phys; 2015 Jun; 42(6):2841-52. PubMed ID: 26127037
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Multicore and GPU algorithms for Nussinov RNA folding.
    Li J; Ranka S; Sahni S
    BMC Bioinformatics; 2014; 15 Suppl 8(Suppl 8):S1. PubMed ID: 25082539
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Multicore and GPU Algorithms for Nussinov RNA Folding.
    Li J; Ranka S; Sahni S
    IEEE Int Conf Comput Adv Bio Med Sci; 2013; ():. PubMed ID: 24385211
    [TBL] [Abstract][Full Text] [Related]  

  • 20. CMSA: a heterogeneous CPU/GPU computing system for multiple similar RNA/DNA sequence alignment.
    Chen X; Wang C; Tang S; Yu C; Zou Q
    BMC Bioinformatics; 2017 Jun; 18(1):315. PubMed ID: 28646874
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 6.