134 related articles for article (PubMed ID: 38907892)
1. Benchmarking NGS-Based HLA Typing Algorithms.
Thuesen NH; Klausen MS
Methods Mol Biol; 2024; 2809():87-99. PubMed ID: 38907892
[TBL] [Abstract][Full Text] [Related]
2. Benchmarking the Human Leukocyte Antigen Typing Performance of Three Assays and Seven Next-Generation Sequencing-Based Algorithms.
Liu P; Yao M; Gong Y; Song Y; Chen Y; Ye Y; Liu X; Li F; Dong H; Meng R; Chen H; Zheng A
Front Immunol; 2021; 12():652258. PubMed ID: 33868290
[TBL] [Abstract][Full Text] [Related]
3. HLA typing by next-generation sequencing - getting closer to reality.
Gabriel C; Fürst D; Faé I; Wenda S; Zollikofer C; Mytilineos J; Fischer GF
Tissue Antigens; 2014 Feb; 83(2):65-75. PubMed ID: 24447174
[TBL] [Abstract][Full Text] [Related]
4. Benchmarking freely available HLA typing algorithms across varying genes, coverages and typing resolutions.
Thuesen NH; Klausen MS; Gopalakrishnan S; Trolle T; Renaud G
Front Immunol; 2022; 13():987655. PubMed ID: 36426357
[TBL] [Abstract][Full Text] [Related]
5. A New Human Leukocyte Antigen Typing Algorithm Combined With Currently Available Genotyping Tools Based on Next-Generation Sequencing Data and Guidelines to Select the Most Likely Human Leukocyte Antigen Genotype.
Lee M; Seo JH; Song S; Song IH; Kim SY; Kim YA; Gong G; Kim JE; Lee HJ
Front Immunol; 2021; 12():688183. PubMed ID: 34659196
[TBL] [Abstract][Full Text] [Related]
6. OptiType: precision HLA typing from next-generation sequencing data.
Szolek A; Schubert B; Mohr C; Sturm M; Feldhahn M; Kohlbacher O
Bioinformatics; 2014 Dec; 30(23):3310-6. PubMed ID: 25143287
[TBL] [Abstract][Full Text] [Related]
7. Performance Characteristics and Validation of Next-Generation Sequencing for Human Leucocyte Antigen Typing.
Weimer ET; Montgomery M; Petraroia R; Crawford J; Schmitz JL
J Mol Diagn; 2016 Sep; 18(5):668-675. PubMed ID: 27376474
[TBL] [Abstract][Full Text] [Related]
8. Application of High-Throughput Next-Generation Sequencing for HLA Typing on Buccal Extracted DNA: Results from over 10,000 Donor Recruitment Samples.
Yin Y; Lan JH; Nguyen D; Valenzuela N; Takemura P; Bolon YT; Springer B; Saito K; Zheng Y; Hague T; Pasztor A; Horvath G; Rigo K; Reed EF; Zhang Q
PLoS One; 2016; 11(10):e0165810. PubMed ID: 27798706
[TBL] [Abstract][Full Text] [Related]
9. Performance of a multiplexed amplicon-based next-generation sequencing assay for HLA typing.
Liu C; Duffy BF; Weimer ET; Montgomery MC; Jennemann JE; Hill R; Phelan D; Lay L; Parikh BA
PLoS One; 2020; 15(4):e0232050. PubMed ID: 32324777
[TBL] [Abstract][Full Text] [Related]
10. Rapid High-Resolution Typing of Class I HLA Genes by Nanopore Sequencing.
Liu C; Berry R
Methods Mol Biol; 2020; 2120():93-99. PubMed ID: 32124313
[TBL] [Abstract][Full Text] [Related]
11. Concurrent typing of over 4000 samples by long-range PCR amplicon-based NGS and rSSO revealed the need to verify NGS typing for HLA allelic dropouts.
Kong D; Lee N; Dela Cruz ID; Dames C; Maruthamuthu S; Golden T; Rajalingam R
Hum Immunol; 2021 Aug; 82(8):581-587. PubMed ID: 33980471
[TBL] [Abstract][Full Text] [Related]
12. HLA Typing from Short-Read Sequencing Data with OptiType.
Szolek A
Methods Mol Biol; 2018; 1802():215-223. PubMed ID: 29858812
[TBL] [Abstract][Full Text] [Related]
13. Assessing a single targeted next generation sequencing for human leukocyte antigen typing protocol for interoperability, as performed by users with variable experience.
Gandhi MJ; Ferriola D; Lind C; Duke JL; Huynh A; Papazoglou A; Mackiewicz K; Christiansen M; Dong W; Hsu S; Thomas D; Schneider B; Pierce E; Kearns J; Kamoun M; Monos D; Askar M
Hum Immunol; 2017 Oct; 78(10):642-648. PubMed ID: 28732721
[TBL] [Abstract][Full Text] [Related]
14. Systematic comparative study of computational methods for HLA typing from next-generation sequencing.
Yu Y; Wang K; Fahira A; Yang Q; Sun R; Li Z; Wang Z; Shi Y
HLA; 2021 Jun; 97(6):481-492. PubMed ID: 33655664
[TBL] [Abstract][Full Text] [Related]
15. Comparison of Sequence Specific Primers in the Next Generation Sequencing in Human Leukocyte Antigen Typing for Transplant Recipients.
Tipu HN
J Coll Physicians Surg Pak; 2020 Nov; 30(11):1138-1142. PubMed ID: 33222728
[TBL] [Abstract][Full Text] [Related]
16. Determining performance characteristics of an NGS-based HLA typing method for clinical applications.
Duke JL; Lind C; Mackiewicz K; Ferriola D; Papazoglou A; Gasiewski A; Heron S; Huynh A; McLaughlin L; Rogers M; Slavich L; Walker R; Monos DS
HLA; 2016 Mar; 87(3):141-52. PubMed ID: 26880737
[TBL] [Abstract][Full Text] [Related]
17. HLA typing from 1000 genomes whole genome and whole exome illumina data.
Major E; Rigó K; Hague T; Bérces A; Juhos S
PLoS One; 2013; 8(11):e78410. PubMed ID: 24223151
[TBL] [Abstract][Full Text] [Related]
18. NanoHLA: A Method for Human Leukocyte Antigen Class I Genes Typing Without Error Correction Based on Nanopore Sequencing Data.
Lang J; Qin L
Methods Mol Biol; 2024; 2809():115-126. PubMed ID: 38907894
[TBL] [Abstract][Full Text] [Related]
19. HLA genotyping in the clinical laboratory: comparison of next-generation sequencing methods.
Profaizer T; Lázár-Molnár E; Close DW; Delgado JC; Kumánovics A
HLA; 2016 Jul; 88(1-2):14-24. PubMed ID: 27524804
[TBL] [Abstract][Full Text] [Related]
20. The impact of next-generation sequencing technologies on HLA research.
Hosomichi K; Shiina T; Tajima A; Inoue I
J Hum Genet; 2015 Nov; 60(11):665-73. PubMed ID: 26311539
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
