125 related articles for article (PubMed ID: 38932165)
1. IAVCP (Influenza A Virus Consensus and Phylogeny): Automatic Identification of the Genomic Sequence of the Influenza A Virus from High-Throughput Sequencing Data.
Paremskaia AI; Volchkov PY; Deviatkin AA
Viruses; 2024 May; 16(6):. PubMed ID: 38932165
[TBL] [Abstract][Full Text] [Related]
2. Systematic phylogenetic analysis of influenza A virus reveals many novel mosaic genome segments.
Lam TT; Chong YL; Shi M; Hon CC; Li J; Martin DP; Tang JW; Mok CK; Shih SR; Yip CW; Jiang J; Hui RK; Pybus OG; Holmes EC; Leung FC
Infect Genet Evol; 2013 Aug; 18():367-78. PubMed ID: 23548803
[TBL] [Abstract][Full Text] [Related]
3. Analysis of the genetic diversity of influenza A viruses using next-generation DNA sequencing.
Van den Hoecke S; Verhelst J; Vuylsteke M; Saelens X
BMC Genomics; 2015 Feb; 16(1):79. PubMed ID: 25758772
[TBL] [Abstract][Full Text] [Related]
4. Parallel evolution between genomic segments of seasonal human influenza viruses reveals RNA-RNA relationships.
Jones JE; Le Sage V; Padovani GH; Calderon M; Wright ES; Lakdawala SS
Elife; 2021 Aug; 10():. PubMed ID: 34448455
[TBL] [Abstract][Full Text] [Related]
5. Next generation sequencing for whole genome analysis and surveillance of influenza A viruses.
McGinnis J; Laplante J; Shudt M; George KS
J Clin Virol; 2016 Jun; 79():44-50. PubMed ID: 27085509
[TBL] [Abstract][Full Text] [Related]
6. Sequencing Framework for the Sensitive Detection and Precise Mapping of Defective Interfering Particle-Associated Deletions across Influenza A and B Viruses.
Alnaji FG; Holmes JR; Rendon G; Vera JC; Fields CJ; Martin BE; Brooke CB
J Virol; 2019 Jun; 93(11):. PubMed ID: 30867305
[TBL] [Abstract][Full Text] [Related]
7. New approaches for unravelling reassortment pathways.
Svinti V; Cotton JA; McInerney JO
BMC Evol Biol; 2013 Jan; 13():1. PubMed ID: 23279962
[TBL] [Abstract][Full Text] [Related]
8. Use of hemagglutinin and neuraminidase amplicon-based high-throughput sequencing with variant analysis to detect co-infection and resolve identical consensus sequences of seasonal influenza in a university setting.
Faleye TOC; Adams D; Adhikari S; Sandrolini H; Halden RU; Varsani A; Scotch M
BMC Infect Dis; 2021 Aug; 21(1):810. PubMed ID: 34388979
[TBL] [Abstract][Full Text] [Related]
9. Rapid genome sequencing and characterization of novel avian-origin influenza A H7N9 virus directly from clinical sample by semiconductor sequencing.
Hu Y; Ren X; Li L; Xiao Y; Dong J; Sun L; Zhu Y; Yang F; Zhang X; Jin Q
J Clin Virol; 2015 Dec; 73():84-88. PubMed ID: 26580409
[TBL] [Abstract][Full Text] [Related]
10. PhyloFlu, a DNA microarray for determining the phylogenetic origin of influenza A virus gene segments and the genomic fingerprint of viral strains.
Paulin LF; de los D Soto-Del Río M; Sánchez I; Hernández J; Gutiérrez-Ríos RM; López-Martínez I; Wong-Chew RM; Parissi-Crivelli A; Isa P; López S; Arias CF
J Clin Microbiol; 2014 Mar; 52(3):803-13. PubMed ID: 24353006
[TBL] [Abstract][Full Text] [Related]
11. Discriminating Clonotypes of Influenza A Virus Genes by Nanopore Sequencing.
Cao Y; Liu H; Yan Y; Liu W; Liu D; Li J
Int J Mol Sci; 2021 Sep; 22(18):. PubMed ID: 34576230
[TBL] [Abstract][Full Text] [Related]
12. Metagenomic Nanopore Sequencing of Influenza Virus Direct from Clinical Respiratory Samples.
Lewandowski K; Xu Y; Pullan ST; Lumley SF; Foster D; Sanderson N; Vaughan A; Morgan M; Bright N; Kavanagh J; Vipond R; Carroll M; Marriott AC; Gooch KE; Andersson M; Jeffery K; Peto TEA; Crook DW; Walker AS; Matthews PC
J Clin Microbiol; 2019 Dec; 58(1):. PubMed ID: 31666364
[TBL] [Abstract][Full Text] [Related]
13. INSaFLU: an automated open web-based bioinformatics suite "from-reads" for influenza whole-genome-sequencing-based surveillance.
Borges V; Pinheiro M; Pechirra P; Guiomar R; Gomes JP
Genome Med; 2018 Jun; 10(1):46. PubMed ID: 29954441
[TBL] [Abstract][Full Text] [Related]
14. Contamination-controlled high-throughput whole genome sequencing for influenza A viruses using the MiSeq sequencer.
Lee HK; Lee CK; Tang JW; Loh TP; Koay ES
Sci Rep; 2016 Sep; 6():33318. PubMed ID: 27624998
[TBL] [Abstract][Full Text] [Related]
15. Positive Selection Drives Preferred Segment Combinations during Influenza Virus Reassortment.
Zeldovich KB; Liu P; Renzette N; Foll M; Pham ST; Venev SV; Gallagher GR; Bolon DN; Kurt-Jones EA; Jensen JD; Caffrey DR; Schiffer CA; Kowalik TF; Wang JP; Finberg RW
Mol Biol Evol; 2015 Jun; 32(6):1519-32. PubMed ID: 25713211
[TBL] [Abstract][Full Text] [Related]
16. Use of Genome Sequencing to Define Institutional Influenza Outbreaks, Toronto, Ontario, Canada, 2014-15.
MacFadden DR; McGeer A; Athey T; Perusini S; Olsha R; Li A; Eshaghi A; Gubbay JB; Hanage WP
Emerg Infect Dis; 2018 Mar; 24(3):492-497. PubMed ID: 29460729
[TBL] [Abstract][Full Text] [Related]
17. Progress and Challenge in Computational Identification of Influenza Virus Reassortment.
Ding X; Qin L; Meng J; Peng Y; Wu A; Jiang T
Virol Sin; 2021 Dec; 36(6):1273-1283. PubMed ID: 34037948
[TBL] [Abstract][Full Text] [Related]
18. Influenza genome diversity and evolution.
Tsai KN; Chen GW
Microbes Infect; 2011 May; 13(5):479-88. PubMed ID: 21276870
[TBL] [Abstract][Full Text] [Related]
19. Integrating patient and whole-genome sequencing data to provide insights into the epidemiology of seasonal influenza A(H3N2) viruses.
Goldstein EJ; Harvey WT; Wilkie GS; Shepherd SJ; MacLean AR; Murcia PR; Gunson RN
Microb Genom; 2018 Jan; 4(1):. PubMed ID: 29310750
[TBL] [Abstract][Full Text] [Related]
20. Molecular Evolution and Emergence of H5N6 Avian Influenza Virus in Central China.
Du Y; Chen M; Yang J; Jia Y; Han S; Holmes EC; Cui J
J Virol; 2017 Jun; 91(12):. PubMed ID: 28404845
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]