These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

135 related articles for article (PubMed ID: 39160220)

  • 1. Simulation of CRISPR-Cas9 editing on evolving barcode and accuracy of lineage tracing.
    Liu F; Zhang X; Yang Y
    Sci Rep; 2024 Aug; 14(1):19213. PubMed ID: 39160220
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Quantitative Analysis of Synthetic Cell Lineage Tracing Using Nuclease Barcoding.
    Schmidt ST; Zimmerman SM; Wang J; Kim SK; Quake SR
    ACS Synth Biol; 2017 Jun; 6(6):936-942. PubMed ID: 28264564
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Large-scale reconstruction of cell lineages using single-cell readout of transcriptomes and CRISPR-Cas9 barcodes by scGESTALT.
    Raj B; Gagnon JA; Schier AF
    Nat Protoc; 2018 Nov; 13(11):2685-2713. PubMed ID: 30353175
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Startle: A star homoplasy approach for CRISPR-Cas9 lineage tracing.
    Sashittal P; Schmidt H; Chan M; Raphael BJ
    Cell Syst; 2023 Dec; 14(12):1113-1121.e9. PubMed ID: 38128483
    [TBL] [Abstract][Full Text] [Related]  

  • 5. LinRace: cell division history reconstruction of single cells using paired lineage barcode and gene expression data.
    Pan X; Li H; Putta P; Zhang X
    Nat Commun; 2023 Dec; 14(1):8388. PubMed ID: 38104156
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Lineage tracing using a Cas9-deaminase barcoding system targeting endogenous L1 elements.
    Hwang B; Lee W; Yum SY; Jeon Y; Cho N; Jang G; Bang D
    Nat Commun; 2019 Mar; 10(1):1234. PubMed ID: 30874552
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A New Generation of Lineage Tracing Dynamically Records Cell Fate Choices.
    Yao M; Ren T; Pan Y; Xue X; Li R; Zhang L; Li Y; Huang K
    Int J Mol Sci; 2022 Apr; 23(9):. PubMed ID: 35563412
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Theoretical guarantees for phylogeny inference from single-cell lineage tracing.
    Wang R; Zhang R; Khodaverdian A; Yosef N
    Proc Natl Acad Sci U S A; 2023 Mar; 120(12):e2203352120. PubMed ID: 36927151
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Whole-organism lineage tracing by combinatorial and cumulative genome editing.
    McKenna A; Findlay GM; Gagnon JA; Horwitz MS; Schier AF; Shendure J
    Science; 2016 Jul; 353(6298):aaf7907. PubMed ID: 27229144
    [TBL] [Abstract][Full Text] [Related]  

  • 10. CRISPR-Cas9-mediated barcode insertion into
    Higgins SA; Kara Murdoch F; Clifton JM; Brooks JH; Fillinger KL; Middleton JK; Heater BS
    Microbiol Spectr; 2024 Aug; 12(8):e0000324. PubMed ID: 38949306
    [TBL] [Abstract][Full Text] [Related]  

  • 11. INDEL detection, the 'Achilles heel' of precise genome editing: a survey of methods for accurate profiling of gene editing induced indels.
    Bennett EP; Petersen BL; Johansen IE; Niu Y; Yang Z; Chamberlain CA; Met Ö; Wandall HH; Frödin M
    Nucleic Acids Res; 2020 Dec; 48(21):11958-11981. PubMed ID: 33170255
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Functionalized Lineage Tracing for the Study and Manipulation of Heterogeneous Cell Populations.
    Gardner A; Morgan D; Al'Khafaji A; Brock A
    Methods Mol Biol; 2022; 2394():109-131. PubMed ID: 35094325
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Single-cell lineage tracing by integrating CRISPR-Cas9 mutations with transcriptomic data.
    Zafar H; Lin C; Bar-Joseph Z
    Nat Commun; 2020 Jun; 11(1):3055. PubMed ID: 32546686
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Plasmid-Based CRISPR-Cas9 Gene Editing in Multiple
    Lombardi L; Oliveira-Pacheco J; Butler G
    mSphere; 2019 Mar; 4(2):. PubMed ID: 30867327
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Single-Strand Annealing Plays a Major Role in Double-Strand DNA Break Repair following CRISPR-Cas9 Cleavage in
    Zhang WW; Matlashewski G
    mSphere; 2019 Aug; 4(4):. PubMed ID: 31434745
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain.
    Raj B; Wagner DE; McKenna A; Pandey S; Klein AM; Shendure J; Gagnon JA; Schier AF
    Nat Biotechnol; 2018 Jun; 36(5):442-450. PubMed ID: 29608178
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Inference of single-cell phylogenies from lineage tracing data using Cassiopeia.
    Jones MG; Khodaverdian A; Quinn JJ; Chan MM; Hussmann JA; Wang R; Xu C; Weissman JS; Yosef N
    Genome Biol; 2020 Apr; 21(1):92. PubMed ID: 32290857
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Defining endogenous barcoding sites for CRISPR/Cas9-based cell lineage tracing in zebrafish.
    Ye C; Chen Z; Liu Z; Wang F; He X
    J Genet Genomics; 2020 Feb; 47(2):85-91. PubMed ID: 32173285
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Machine-learning-optimized Cas12a barcoding enables the recovery of single-cell lineages and transcriptional profiles.
    Hughes NW; Qu Y; Zhang J; Tang W; Pierce J; Wang C; Agrawal A; Morri M; Neff N; Winslow MM; Wang M; Cong L
    Mol Cell; 2022 Aug; 82(16):3103-3118.e8. PubMed ID: 35752172
    [TBL] [Abstract][Full Text] [Related]  

  • 20. DNA barcodes evolve for high-resolution cell lineage tracing.
    Masuyama N; Mori H; Yachie N
    Curr Opin Chem Biol; 2019 Oct; 52():63-71. PubMed ID: 31212208
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.