These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
124 related articles for article (PubMed ID: 39259968)
1. Exploring the Global Reaction Coordinate for Retinal Photoisomerization: A Graph Theory-Based Machine Learning Approach. Giudetti G; Mukherjee M; Nandi S; Agrawal S; Prezhdo OV; Nakano A J Chem Inf Model; 2024 Sep; 64(18):7027-7034. PubMed ID: 39259968 [TBL] [Abstract][Full Text] [Related]
2. Probing the π→π* photoisomerization mechanism of cis-azobenzene by multi-state ab initio on-the-fly trajectory dynamics simulation. Yu L; Xu C; Zhu C Phys Chem Chem Phys; 2015 Jul; 17(27):17646-60. PubMed ID: 26081715 [TBL] [Abstract][Full Text] [Related]
3. Nonadiabatic hybrid quantum and molecular mechanic simulations of azobenzene photoswitching in bulk liquid environment. Böckmann M; Doltsinis NL; Marx D J Phys Chem A; 2010 Jan; 114(2):745-54. PubMed ID: 19928885 [TBL] [Abstract][Full Text] [Related]
4. Enhanced photoswitching of bridged azobenzene studied by nonadiabatic ab initio simulation. Böckmann M; Doltsinis NL; Marx D J Chem Phys; 2012 Dec; 137(22):22A505. PubMed ID: 23249042 [TBL] [Abstract][Full Text] [Related]
5. Nonadiabatic molecular dynamics study of the cis-trans photoisomerization of azobenzene excited to the S1 state. Pederzoli M; Pittner J; Barbatti M; Lischka H J Phys Chem A; 2011 Oct; 115(41):11136-43. PubMed ID: 21688804 [TBL] [Abstract][Full Text] [Related]
6. Nonadiabatic ab initio dynamics of a model protonated Schiff base of 9-cis retinal. Chung WC; Nanbu S; Ishida T J Phys Chem A; 2010 Aug; 114(32):8190-201. PubMed ID: 20666503 [TBL] [Abstract][Full Text] [Related]
7. How Photoisomerization Drives Peptide Folding and Unfolding: Insights from QM/MM and MM Dynamics Simulations. Xia SH; Cui G; Fang WH; Thiel W Angew Chem Int Ed Engl; 2016 Feb; 55(6):2067-72. PubMed ID: 26836339 [TBL] [Abstract][Full Text] [Related]
8. A Look Inside the Black Box of Machine Learning Photodynamics Simulations. Li J; Lopez SA Acc Chem Res; 2022 Jul; 55(14):1972-1984. PubMed ID: 35796602 [TBL] [Abstract][Full Text] [Related]
9. Photo-induced isomerization of ethylene-bridged azobenzene explored by ab initio based non-adiabatic dynamics simulation: a comparative investigation of the isomerization in the gas and solution phases. Cao J; Liu LH; Fang WH; Xie ZZ; Zhang Y J Chem Phys; 2013 Apr; 138(13):134306. PubMed ID: 23574226 [TBL] [Abstract][Full Text] [Related]
10. Local Density Fluctuations Predict Photoisomerization Quantum Yield of Azobenzene-Modified DNA. Kingsland A; Samai S; Yan Y; Ginger DS; Maibaum L J Phys Chem Lett; 2016 Aug; 7(15):3027-31. PubMed ID: 27428569 [TBL] [Abstract][Full Text] [Related]
12. QM/MM Studies on Photoisomerization Dynamics of Azobenzene Chromophore Tethered to a DNA Duplex: Local Unpaired Nucleobase Plays a Crucial Role. Wu D; Wang YT; Fang WH; Cui G; Thiel W Chem Asian J; 2018 Apr; 13(7):780-784. PubMed ID: 29446260 [TBL] [Abstract][Full Text] [Related]
13. Ultrafast Photocontrolled Rotation in a Molecular Motor Investigated by Machine Learning-Based Nonadiabatic Dynamics Simulations. Xu H; Zhang B; Tao Y; Xu W; Hu B; Yan F; Wen J J Phys Chem A; 2023 Sep; 127(37):7682-7693. PubMed ID: 37672626 [TBL] [Abstract][Full Text] [Related]
14. Nonadiabatic Dynamics Simulations for Photoinduced Processes in Molecules and Semiconductors: Methodologies and Applications. Liu XY; Chen WK; Fang WH; Cui G J Chem Theory Comput; 2023 Dec; 19(23):8491-8522. PubMed ID: 37984502 [TBL] [Abstract][Full Text] [Related]
16. Graph Theoretic Molecular Fragmentation for Multidimensional Potential Energy Surfaces Yield an Adaptive and General Transfer Machine Learning Protocol. Zhu X; Iyengar SS J Chem Theory Comput; 2022 Sep; 18(9):5125-5144. PubMed ID: 35994592 [TBL] [Abstract][Full Text] [Related]
17. Nonadiabatic Photodynamics of Retinal Protonated Schiff Base in Channelrhodopsin 2. Liang R; Liu F; Martínez TJ J Phys Chem Lett; 2019 Jun; 10(11):2862-2868. PubMed ID: 31083920 [TBL] [Abstract][Full Text] [Related]
18. Photoinduced quantum dynamics of ortho- and para-fulvene: hindered photoisomerization due to mode selective fast radiationless decay via a conical intersection. Alfalah S; Belz S; Deeb O; Leibscher M; Manz J; Zilberg S J Chem Phys; 2009 Mar; 130(12):124318. PubMed ID: 19334841 [TBL] [Abstract][Full Text] [Related]
19. Azobenzene photoisomerization-induced destabilization of B-DNA. Biswas M; Burghardt I Biophys J; 2014 Aug; 107(4):932-40. PubMed ID: 25140428 [TBL] [Abstract][Full Text] [Related]
20. Electrostatic Control of Photoisomerization in Channelrhodopsin 2. Liang R; Yu JK; Meisner J; Liu F; Martinez TJ J Am Chem Soc; 2021 Apr; 143(14):5425-5437. PubMed ID: 33794085 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]