151 related articles for article (PubMed ID: 7541696)
1. Molecular mechanics and dynamics studies on two structurally related amide-modified DNA backbones for antisense technology.
Fritsch V; De Mesmaeker A; Waldner A; Lebreton J; Blommers MJ; Wolf RM
Bioorg Med Chem; 1995 Mar; 3(3):321-35. PubMed ID: 7541696
[TBL] [Abstract][Full Text] [Related]
2. Conformation of formacetal and 3'-thioformacetal nucleotide linkers and stability of their antisense RNA.DNA hybrid duplexes.
Rice JS; Gao X
Biochemistry; 1997 Jan; 36(2):399-411. PubMed ID: 9003193
[TBL] [Abstract][Full Text] [Related]
3. Molecular dynamics simulations of a r(GA12G).d(CT12C) hybrid duplex.
Fritsch V; Wolf RM
J Biomol Struct Dyn; 1994 Jun; 11(6):1161-74. PubMed ID: 7524540
[TBL] [Abstract][Full Text] [Related]
4. Recognition of RNA by amide modified backbone nucleic acids: molecular dynamics simulations of DNA-RNA hybrids in aqueous solution.
Nina M; Fonné-Pfister R; Beaudegnies R; Chekatt H; Jung PM; Murphy-Kessabi F; De Mesmaeker A; Wendeborn S
J Am Chem Soc; 2005 Apr; 127(16):6027-38. PubMed ID: 15839703
[TBL] [Abstract][Full Text] [Related]
5. NMR studies of fully modified locked nucleic acid (LNA) hybrids: solution structure of an LNA:RNA hybrid and characterization of an LNA:DNA hybrid.
Nielsen KE; Rasmussen J; Kumar R; Wengel J; Jacobsen JP; Petersen M
Bioconjug Chem; 2004; 15(3):449-57. PubMed ID: 15149171
[TBL] [Abstract][Full Text] [Related]
6. Studies of a chemically modified oligodeoxynucleotide containing a 5-atom amide backbone which exhibits improved binding to RNA.
Wilds CJ; Minasov G; Natt F; von Matt P; Altmann KH; Egli M
Nucleosides Nucleotides Nucleic Acids; 2001; 20(4-7):991-4. PubMed ID: 11563161
[TBL] [Abstract][Full Text] [Related]
7. Solution structure of an RNA x DNA hybrid duplex containing a 3'-thioformacetal linker and an RNA A-tract.
Cross CW; Rice JS; Gao X
Biochemistry; 1997 Apr; 36(14):4096-107. PubMed ID: 9100003
[TBL] [Abstract][Full Text] [Related]
8. Helix-stabilizing compounds CC-1065 and U-71,184 bind to RNA-DNA and DNA-DNA duplexes containing modified internucleotide linkages and stabilize duplexes against thermal melting.
Kim DY; Shih DS; Cho DY; Swenson DH
Antisense Res Dev; 1995; 5(1):49-57. PubMed ID: 7542048
[TBL] [Abstract][Full Text] [Related]
9. Sugar conformations at hybrid duplex junctions in HIV-1 and Okazaki fragments.
Salazar M; Champoux JJ; Reid BR
Biochemistry; 1993 Jan; 32(3):739-44. PubMed ID: 8380708
[TBL] [Abstract][Full Text] [Related]
10. Insights into structure, dynamics and hydration of locked nucleic acid (LNA) strand-based duplexes from molecular dynamics simulations.
Pande V; Nilsson L
Nucleic Acids Res; 2008 Mar; 36(5):1508-16. PubMed ID: 18203740
[TBL] [Abstract][Full Text] [Related]
11. Conformational study of DNA-RNA duplexes containing MMI substituted phosphodiester linkages by FTIR spectroscopy.
Gousset H; Liquier J; Taillandier E; Sanghvi YS; Peoch D
J Biomol Struct Dyn; 1998 Apr; 15(5):931-6. PubMed ID: 9619514
[TBL] [Abstract][Full Text] [Related]
12. Unusual conformation of a 3'-thioformacetal linkage in a DNA duplex.
Gao X; Jeffs PW
J Biomol NMR; 1994 Jan; 4(1):17-34. PubMed ID: 8130639
[TBL] [Abstract][Full Text] [Related]
13. Interplay of LNA and 2'-O-methyl RNA in the structure and thermodynamics of RNA hybrid systems: a molecular dynamics study using the revised AMBER force field and comparison with experimental results.
Yildirim I; Kierzek E; Kierzek R; Schatz GC
J Phys Chem B; 2014 Dec; 118(49):14177-87. PubMed ID: 25268896
[TBL] [Abstract][Full Text] [Related]
14. Structures, dynamics, and stabilities of fully modified locked nucleic acid (β-D-LNA and α-L-LNA) duplexes in comparison to pure DNA and RNA duplexes.
Suresh G; Priyakumar UD
J Phys Chem B; 2013 May; 117(18):5556-64. PubMed ID: 23617391
[TBL] [Abstract][Full Text] [Related]
15. Inclusion of methoxy groups inverts the thermodynamic stabilities of DNA-RNA hybrid duplexes: A molecular dynamics simulation study.
Suresh G; Priyakumar UD
J Mol Graph Model; 2015 Sep; 61():150-9. PubMed ID: 26254870
[TBL] [Abstract][Full Text] [Related]
16. Structural properties of DNA:RNA duplexes containing 2'-O-methyl and 2'-S-methyl substitutions: a molecular dynamics investigation.
Venkateswarlu D; Lind KE; Mohan V; Manoharan M; Ferguson DM
Nucleic Acids Res; 1999 May; 27(10):2189-95. PubMed ID: 10219092
[TBL] [Abstract][Full Text] [Related]
17. Crystal structure of an adenine bulge in the RNA chain of a DNA.RNA hybrid, d(CTCCTCTTC).r(gaagagagag).
Sudarsanakumar C; Xiong Y; Sundaralingam M
J Mol Biol; 2000 May; 299(1):103-12. PubMed ID: 10860725
[TBL] [Abstract][Full Text] [Related]
18. RNA-Binding affinities and crystal structure of oligonucleotides containing five-atom amide-based backbone structures.
Pallan PS; von Matt P; Wilds CJ; Altmann KH; Egli M
Biochemistry; 2006 Jul; 45(26):8048-57. PubMed ID: 16800629
[TBL] [Abstract][Full Text] [Related]
19. Binding affinity and specificity of Escherichia coli RNase H1: impact on the kinetics of catalysis of antisense oligonucleotide-RNA hybrids.
Lima WF; Crooke ST
Biochemistry; 1997 Jan; 36(2):390-8. PubMed ID: 9003192
[TBL] [Abstract][Full Text] [Related]
20. NMR and UV studies of 3'-S-phosphorothiolate modified DNA in a DNA : RNA hybrid dodecamer duplex; implications for antisense drug design.
Beevers AP; Fettes KJ; Sabbagh G; Murad FK; Arnold JR; Cosstick R; Fisher J
Org Biomol Chem; 2004 Jan; 2(1):114-9. PubMed ID: 14737669
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
