136 related articles for article (PubMed ID: 7542191)
1. A method for predicting common structures of homologous RNAs.
Le SY; Zhang K; Maizel JV
Comput Biomed Res; 1995 Feb; 28(1):53-66. PubMed ID: 7542191
[TBL] [Abstract][Full Text] [Related]
2. Predicting common foldings of homologous RNAs.
Le SY; Zuker M
J Biomol Struct Dyn; 1991 Apr; 8(5):1027-44. PubMed ID: 1715169
[TBL] [Abstract][Full Text] [Related]
3. RNAlign program: alignment of RNA sequences using both primary and secondary structures.
Corpet F; Michot B
Comput Appl Biosci; 1994 Jul; 10(4):389-99. PubMed ID: 7528630
[TBL] [Abstract][Full Text] [Related]
4. TurboFold: iterative probabilistic estimation of secondary structures for multiple RNA sequences.
Harmanci AO; Sharma G; Mathews DH
BMC Bioinformatics; 2011 Apr; 12():108. PubMed ID: 21507242
[TBL] [Abstract][Full Text] [Related]
5. A graph theoretical approach for predicting common RNA secondary structure motifs including pseudoknots in unaligned sequences.
Ji Y; Xu X; Stormo GD
Bioinformatics; 2004 Jul; 20(10):1591-602. PubMed ID: 14962926
[TBL] [Abstract][Full Text] [Related]
6. ConStruct: a tool for thermodynamic controlled prediction of conserved secondary structure.
Lück R; Gräf S; Steger G
Nucleic Acids Res; 1999 Nov; 27(21):4208-17. PubMed ID: 10518612
[TBL] [Abstract][Full Text] [Related]
7. Secondary structure of the central region of bacteriophage MS2 RNA. Conservation and biological significance.
Skripkin EA; Adhin MR; de Smit MH; van Duin J
J Mol Biol; 1990 Jan; 211(2):447-63. PubMed ID: 2407856
[TBL] [Abstract][Full Text] [Related]
8. Prediction of common folding structures of homologous RNAs.
Han K; Kim HJ
Nucleic Acids Res; 1993 Mar; 21(5):1251-7. PubMed ID: 7681944
[TBL] [Abstract][Full Text] [Related]
9. Thermodynamic matchers for the construction of the cuckoo RNA family.
Reinkensmeier J; Giegerich R
RNA Biol; 2015; 12(2):197-207. PubMed ID: 25779873
[TBL] [Abstract][Full Text] [Related]
10. A method for aligning RNA secondary structures and its application to RNA motif detection.
Liu J; Wang JT; Hu J; Tian B
BMC Bioinformatics; 2005 Apr; 6():89. PubMed ID: 15817128
[TBL] [Abstract][Full Text] [Related]
11. Prediction of Secondary Structures Conserved in Multiple RNA Sequences.
Xu ZZ; Mathews DH
Methods Mol Biol; 2016; 1490():35-50. PubMed ID: 27665591
[TBL] [Abstract][Full Text] [Related]
12. Direct RNA motif definition and identification from multiple sequence alignments using secondary structure profiles.
Gautheret D; Lambert A
J Mol Biol; 2001 Nov; 313(5):1003-11. PubMed ID: 11700055
[TBL] [Abstract][Full Text] [Related]
13. Sampled ensemble neutrality as a feature to classify potential structured RNAs.
Pei S; Anthony JS; Meyer MM
BMC Genomics; 2015 Feb; 16(1):35. PubMed ID: 25649229
[TBL] [Abstract][Full Text] [Related]
14. Thermodynamic prediction of conserved secondary structure: application to the RRE element of HIV, the tRNA-like element of CMV and the mRNA of prion protein.
Lück R; Steger G; Riesner D
J Mol Biol; 1996 May; 258(5):813-26. PubMed ID: 8637012
[TBL] [Abstract][Full Text] [Related]
15. Secondary structure prediction for aligned RNA sequences.
Hofacker IL; Fekete M; Stadler PF
J Mol Biol; 2002 Jun; 319(5):1059-66. PubMed ID: 12079347
[TBL] [Abstract][Full Text] [Related]
16. Automatic detection of conserved base pairing patterns in RNA virus genomes.
Hofacker IL; Stadler PF
Comput Chem; 1999 Jun; 23(3-4):401-14. PubMed ID: 10404627
[TBL] [Abstract][Full Text] [Related]
17. Common structures of the 5' non-coding RNA in enteroviruses and rhinoviruses. Thermodynamical stability and statistical significance.
Le SY; Zuker M
J Mol Biol; 1990 Dec; 216(3):729-41. PubMed ID: 2175364
[TBL] [Abstract][Full Text] [Related]
18. An algorithm for searching RNA motifs in genomic sequences.
Liu J; Ma B; Zhang K
Biomol Eng; 2007 Sep; 24(3):343-50. PubMed ID: 17482512
[TBL] [Abstract][Full Text] [Related]
19. Prediction of consensus RNA secondary structures including pseudoknots.
Witwer C; Hofacker IL; Stadler PF
IEEE/ACM Trans Comput Biol Bioinform; 2004; 1(2):66-77. PubMed ID: 17048382
[TBL] [Abstract][Full Text] [Related]
20. Alignment of possible secondary structures in multiple RNA sequences using simulated annealing.
Kim J; Cole JR; Pramanik S
Comput Appl Biosci; 1996 Aug; 12(4):259-67. PubMed ID: 8902352
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
