These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

116 related articles for article (PubMed ID: 7765168)

  • 1. Sensitive methods for determining the relatedness of proteins with limited sequence homology.
    Argos P
    Curr Opin Biotechnol; 1994 Aug; 5(4):361-71. PubMed ID: 7765168
    [TBL] [Abstract][Full Text] [Related]  

  • 2. An integrated approach to the analysis and modeling of protein sequences and structures. III. A comparative study of sequence conservation in protein structural families using multiple structural alignments.
    Yang AS; Honig B
    J Mol Biol; 2000 Aug; 301(3):691-711. PubMed ID: 10966778
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Flexible sequence similarity searching with the FASTA3 program package.
    Pearson WR
    Methods Mol Biol; 2000; 132():185-219. PubMed ID: 10547837
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Robust sequence alignment using evolutionary rates coupled with an amino acid substitution matrix.
    Ndhlovu A; Hazelhurst S; Durand PM
    BMC Bioinformatics; 2015 Aug; 16():255. PubMed ID: 26269100
    [TBL] [Abstract][Full Text] [Related]  

  • 5. An assessment of amino acid exchange matrices in aligning protein sequences: the twilight zone revisited.
    Vogt G; Etzold T; Argos P
    J Mol Biol; 1995 Jun; 249(4):816-31. PubMed ID: 7602593
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Using CLUSTAL for multiple sequence alignments.
    Higgins DG; Thompson JD; Gibson TJ
    Methods Enzymol; 1996; 266():383-402. PubMed ID: 8743695
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Comparison of methods for searching protein sequence databases.
    Pearson WR
    Protein Sci; 1995 Jun; 4(6):1145-60. PubMed ID: 7549879
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Development and validation of a consistency based multiple structure alignment algorithm.
    Ebert J; Brutlag D
    Bioinformatics; 2006 May; 22(9):1080-7. PubMed ID: 16473868
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Scoring profile-to-profile sequence alignments.
    Wang G; Dunbrack RL
    Protein Sci; 2004 Jun; 13(6):1612-26. PubMed ID: 15152092
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Sequence context-specific profiles for homology searching.
    Biegert A; Söding J
    Proc Natl Acad Sci U S A; 2009 Mar; 106(10):3770-5. PubMed ID: 19234132
    [TBL] [Abstract][Full Text] [Related]  

  • 11. ProClust: improved clustering of protein sequences with an extended graph-based approach.
    Pipenbacher P; Schliep A; Schneckener S; Schönhuth A; Schomburg D; Schrader R
    Bioinformatics; 2002; 18 Suppl 2():S182-91. PubMed ID: 12386002
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Relation between weight matrix and substitution matrix: motif search by similarity.
    Zheng WM
    Bioinformatics; 2005 Apr; 21(7):938-43. PubMed ID: 15514002
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Improved pairwise alignments of proteins in the Twilight Zone using local structure predictions.
    Huang YM; Bystroff C
    Bioinformatics; 2006 Feb; 22(4):413-22. PubMed ID: 16352653
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Fold-specific sequence scoring improves protein sequence matching.
    Leelananda SP; Kloczkowski A; Jernigan RL
    BMC Bioinformatics; 2016 Aug; 17(1):328. PubMed ID: 27578239
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Variable gap penalty for protein sequence-structure alignment.
    Madhusudhan MS; Marti-Renom MA; Sanchez R; Sali A
    Protein Eng Des Sel; 2006 Mar; 19(3):129-33. PubMed ID: 16423846
    [TBL] [Abstract][Full Text] [Related]  

  • 16. PFASUM: a substitution matrix from Pfam structural alignments.
    Keul F; Hess M; Goesele M; Hamacher K
    BMC Bioinformatics; 2017 Jun; 18(1):293. PubMed ID: 28583067
    [TBL] [Abstract][Full Text] [Related]  

  • 17. PSI: indexing protein structures for fast similarity search.
    Camoglu O; Kahveci T; Singh AK
    Bioinformatics; 2003; 19 Suppl 1():i81-3. PubMed ID: 12855441
    [TBL] [Abstract][Full Text] [Related]  

  • 18. COMPASS: a tool for comparison of multiple protein alignments with assessment of statistical significance.
    Sadreyev R; Grishin N
    J Mol Biol; 2003 Feb; 326(1):317-36. PubMed ID: 12547212
    [TBL] [Abstract][Full Text] [Related]  

  • 19. BALSA: Bayesian algorithm for local sequence alignment.
    Webb BJ; Liu JS; Lawrence CE
    Nucleic Acids Res; 2002 Mar; 30(5):1268-77. PubMed ID: 11861921
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Incremental window-based protein sequence alignment algorithms.
    Rangwala H; Karypis G
    Bioinformatics; 2007 Jan; 23(2):e17-23. PubMed ID: 17237087
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 6.