84 related articles for article (PubMed ID: 7925946)
1. Distribution profiles of GC content around the translation initiation site in different species.
Mizuno M; Kanehisa M
FEBS Lett; 1994 Sep; 352(1):7-10. PubMed ID: 7925946
[TBL] [Abstract][Full Text] [Related]
2. A relationship between GC content and coding-sequence length.
Oliver JL; Marín A
J Mol Evol; 1996 Sep; 43(3):216-23. PubMed ID: 8703087
[TBL] [Abstract][Full Text] [Related]
3. Nucleotide quartets in the vicinity of eukaryotic transcriptional initiation sites: some DNA and chromatin structural implications.
Nussinov R
DNA; 1987 Feb; 6(1):13-22. PubMed ID: 3829887
[TBL] [Abstract][Full Text] [Related]
4. In silico analysis of 5'-UTRs highlights the prevalence of Shine-Dalgarno and leaderless-dependent mechanisms of translation initiation in bacteria and archaea, respectively.
Srivastava A; Gogoi P; Deka B; Goswami S; Kanaujia SP
J Theor Biol; 2016 Aug; 402():54-61. PubMed ID: 27155047
[TBL] [Abstract][Full Text] [Related]
5. The distribution of GC nucleotides and regulatory sequence motifs in genes and their adjacent sequences.
Jaksik R; Rzeszowska-Wolny J
Gene; 2012 Jan; 492(2):375-81. PubMed ID: 22101187
[TBL] [Abstract][Full Text] [Related]
6. Prediction of translation initiation sites in human mRNA sequences with AUG start codon in weak Kozak context: A neural network approach.
Tikole S; Sankararamakrishnan R
Biochem Biophys Res Commun; 2008 May; 369(4):1166-8. PubMed ID: 18342624
[TBL] [Abstract][Full Text] [Related]
7. High guanine and cytosine content increases mRNA levels in mammalian cells.
Kudla G; Lipinski L; Caffin F; Helwak A; Zylicz M
PLoS Biol; 2006 Jun; 4(6):e180. PubMed ID: 16700628
[TBL] [Abstract][Full Text] [Related]
8. Sole and stable RNA duplexes of G-rich sequences located in the 5'-untranslated region of protooncogenes.
Saxena S; Miyoshi D; Sugimoto N
Biochemistry; 2010 Aug; 49(33):7190-201. PubMed ID: 20672842
[TBL] [Abstract][Full Text] [Related]
9. The sequence flanking translational initiation site in protozoa.
Yamauchi K
Nucleic Acids Res; 1991 May; 19(10):2715-20. PubMed ID: 2041747
[TBL] [Abstract][Full Text] [Related]
10. An unusual 500,000 bases long oscillation of guanine and cytosine content in human chromosome 21.
Li W; Holste D
Comput Biol Chem; 2004 Dec; 28(5-6):393-9. PubMed ID: 15556480
[TBL] [Abstract][Full Text] [Related]
11. pH-Modulated Watson-Crick duplex-quadruplex equilibria of guanine-rich and cytosine-rich DNA sequences 140 base pairs upstream of the c-kit transcription initiation site.
Bucek P; Jaumot J; Aviñó A; Eritja R; Gargallo R
Chemistry; 2009 Nov; 15(46):12663-71. PubMed ID: 19847826
[TBL] [Abstract][Full Text] [Related]
12. Base compositions of genes encoding alpha-actin and lactate dehydrogenase-A from differently adapted vertebrates show no temperature-adaptive variation in G + C content.
Ream RA; Johns GC; Somero GN
Mol Biol Evol; 2003 Jan; 20(1):105-10. PubMed ID: 12519912
[TBL] [Abstract][Full Text] [Related]
13. Efficient translation initiation directed by the 900-nucleotide-long and GC-rich 5' untranslated region of the human retrotransposon LINE-1 mRNA is strictly cap dependent rather than internal ribosome entry site mediated.
Dmitriev SE; Andreev DE; Terenin IM; Olovnikov IA; Prassolov VS; Merrick WC; Shatsky IN
Mol Cell Biol; 2007 Jul; 27(13):4685-97. PubMed ID: 17470553
[TBL] [Abstract][Full Text] [Related]
14. Homopolymer tract length dependent enrichments in functional regions of 27 eukaryotes and their novel dependence on the organism DNA (G+C)% composition.
Zhou Y; Bizzaro JW; Marx KA
BMC Genomics; 2004 Dec; 5():95. PubMed ID: 15598342
[TBL] [Abstract][Full Text] [Related]
15. The consequences of base pair composition biases for regulatory network organization in prokaryotes.
Cordero OX; Hogeweg P
Mol Biol Evol; 2009 Oct; 26(10):2171-3. PubMed ID: 19567917
[TBL] [Abstract][Full Text] [Related]
16. Evidence for conservation and selection of upstream open reading frames suggests probable encoding of bioactive peptides.
Crowe ML; Wang XQ; Rothnagel JA
BMC Genomics; 2006 Jan; 7():16. PubMed ID: 16438715
[TBL] [Abstract][Full Text] [Related]
17. Compositional dynamics of guanine and cytosine content in prokaryotic genomes.
Hu J; Zhao X; Zhang Z; Yu J
Res Microbiol; 2007 May; 158(4):363-70. PubMed ID: 17449227
[TBL] [Abstract][Full Text] [Related]
18. Characterization of transcription initiation, translation initiation, and poly(A) addition sites in the gene-sized macronuclear DNA molecules of Euplotes.
Ghosh S; Jaraczewski JW; Klobutcher LA; Jahn CL
Nucleic Acids Res; 1994 Jan; 22(2):214-21. PubMed ID: 7907176
[TBL] [Abstract][Full Text] [Related]
19. Comparative genomic analysis of translation initiation mechanisms for genes lacking the Shine-Dalgarno sequence in prokaryotes.
Nakagawa S; Niimura Y; Gojobori T
Nucleic Acids Res; 2017 Apr; 45(7):3922-3931. PubMed ID: 28334743
[TBL] [Abstract][Full Text] [Related]
20. Measurements of genomic GC content in plant genomes with flow cytometry: a test for reliability.
Smarda P; Bureš P; Smerda J; Horová L
New Phytol; 2012 Jan; 193(2):513-21. PubMed ID: 22050640
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]