203 related articles for article (PubMed ID: 7937854)
1. Species-specific amplification of tRNA-derived short interspersed repetitive elements (SINEs) by retroposition: a process of parasitization of entire genomes during the evolution of salmonids.
Takasaki N; Murata S; Saitoh M; Kobayashi T; Park L; Okada N
Proc Natl Acad Sci U S A; 1994 Oct; 91(21):10153-7. PubMed ID: 7937854
[TBL] [Abstract][Full Text] [Related]
2. Characterization of species-specifically amplified SINEs in three salmonid species--chum salmon, pink salmon, and kokanee: the local environment of the genome may be important for the generation of a dominant source gene at a newly retroposed locus.
Takasaki N; Park L; Kaeriyama M; Gharrett AJ; Okada N
J Mol Evol; 1996 Feb; 42(2):103-16. PubMed ID: 8919862
[TBL] [Abstract][Full Text] [Related]
3. Determination of the phylogenetic relationships among Pacific salmonids by using short interspersed elements (SINEs) as temporal landmarks of evolution.
Murata S; Takasaki N; Saitoh M; Okada N
Proc Natl Acad Sci U S A; 1993 Aug; 90(15):6995-9. PubMed ID: 8346208
[TBL] [Abstract][Full Text] [Related]
4. The 3' ends of tRNA-derived short interspersed repetitive elements are derived from the 3' ends of long interspersed repetitive elements.
Ohshima K; Hamada M; Terai Y; Okada N
Mol Cell Biol; 1996 Jul; 16(7):3756-64. PubMed ID: 8668192
[TBL] [Abstract][Full Text] [Related]
5. Details of retropositional genome dynamics that provide a rationale for a generic division: the distinct branching of all the pacific salmon and trout (Oncorhynchus) from the Atlantic salmon and trout (Salmo).
Murata S; Takasaki N; Saitoh M; Tachida H; Okada N
Genetics; 1996 Mar; 142(3):915-26. PubMed ID: 8849897
[TBL] [Abstract][Full Text] [Related]
6. The salmon SmaI family of short interspersed repetitive elements (SINEs): interspecific and intraspecific variation of the insertion of SINEs in the genomes of chum and pink salmon.
Takasaki N; Yamaki T; Hamada M; Park L; Okada N
Genetics; 1997 May; 146(1):369-80. PubMed ID: 9136025
[TBL] [Abstract][Full Text] [Related]
7. Generality of the tRNA origin of short interspersed repetitive elements (SINEs). Characterization of three different tRNA-derived retroposons in the octopus.
Ohshima K; Okada N
J Mol Biol; 1994 Oct; 243(1):25-37. PubMed ID: 7932738
[TBL] [Abstract][Full Text] [Related]
8. Shaping and reshaping of salmonid genomes by amplification of tRNA-derived retroposons during evolution.
Kido Y; Aono M; Yamaki T; Matsumoto K; Murata S; Saneyoshi M; Okada N
Proc Natl Acad Sci U S A; 1991 Mar; 88(6):2326-30. PubMed ID: 1848699
[TBL] [Abstract][Full Text] [Related]
9. Distribution of the salmonid Hpa 1 family in the salmonid species demonstrated by in vitro runoff transcription assay of total genomic DNA: a procedure to estimate repetitive frequency and sequence divergence of a certain repetitive family with a few known sequences.
Koishi R; Okada N
J Mol Evol; 1991 Jan; 32(1):43-52. PubMed ID: 1707099
[TBL] [Abstract][Full Text] [Related]
10. Molecular characterization of a short interspersed repetitive element from tobacco that exhibits sequence homology to specific tRNAs.
Yoshioka Y; Matsumoto S; Kojima S; Ohshima K; Okada N; Machida Y
Proc Natl Acad Sci U S A; 1993 Jul; 90(14):6562-6. PubMed ID: 8341669
[TBL] [Abstract][Full Text] [Related]
11. A novel tRNA species as an origin of short interspersed repetitive elements (SINEs). Equine SINEs may have originated from tRNA(Ser).
Sakagami M; Ohshima K; Mukoyama H; Yasue H; Okada N
J Mol Biol; 1994 Jun; 239(5):731-5. PubMed ID: 8014993
[TBL] [Abstract][Full Text] [Related]
12. A newly isolated family of short interspersed repetitive elements (SINEs) in coregonid fishes (whitefish) with sequences that are almost identical to those of the SmaI family of repeats: possible evidence for the horizontal transfer of SINEs.
Hamada M; Kido Y; Himberg M; Reist JD; Ying C; Hasegawa M; Okada N
Genetics; 1997 May; 146(1):355-67. PubMed ID: 9136024
[TBL] [Abstract][Full Text] [Related]
13. Amplification of distinct subfamilies of short interspersed elements during evolution of the Salmonidae.
Kido Y; Himberg M; Takasaki N; Okada N
J Mol Biol; 1994 Sep; 241(5):633-44. PubMed ID: 8071990
[TBL] [Abstract][Full Text] [Related]
14. MIRs are classic, tRNA-derived SINEs that amplified before the mammalian radiation.
Smit AF; Riggs AD
Nucleic Acids Res; 1995 Jan; 23(1):98-102. PubMed ID: 7870595
[TBL] [Abstract][Full Text] [Related]
15. Characterization of a repetitive element detected by NheI in the genomes of Salmo species.
Goodier JL; Davidson WS
Genome; 1994 Aug; 37(4):639-45. PubMed ID: 7958824
[TBL] [Abstract][Full Text] [Related]
16. A novel abundant family of retroposed elements (DAS-SINEs) in the nine-banded armadillo (Dasypus novemcinctus).
Churakov G; Smit AF; Brosius J; Schmitz J
Mol Biol Evol; 2005 Apr; 22(4):886-93. PubMed ID: 15616140
[TBL] [Abstract][Full Text] [Related]
17. Mosaic structure and retropositional dynamics during evolution of subfamilies of short interspersed elements in African cichlids.
Takahashi K; Okada N
Mol Biol Evol; 2002 Aug; 19(8):1303-12. PubMed ID: 12140242
[TBL] [Abstract][Full Text] [Related]
18. Evolution of CHR-2 SINEs in cetartiodactyl genomes: possible evidence for the monophyletic origin of toothed whales.
Nikaido M; Matsuno F; Abe H; Shimamura M; Hamilton H; Matsubayashi H; Okada N
Mamm Genome; 2001 Dec; 12(12):909-15. PubMed ID: 11707777
[TBL] [Abstract][Full Text] [Related]
19. Novel SINE families from salmons validate Parahucho (Salmonidae) as a distinct genus and give evidence that SINEs can incorporate LINE-related 3'-tails of other SINEs.
Matveev V; Nishihara H; Okada N
Mol Biol Evol; 2007 Aug; 24(8):1656-66. PubMed ID: 17470437
[TBL] [Abstract][Full Text] [Related]
20. Several short interspersed repetitive elements (SINEs) in distant species may have originated from a common ancestral retrovirus: characterization of a squid SINE and a possible mechanism for generation of tRNA-derived retroposons.
Ohshima K; Koishi R; Matsuo M; Okada N
Proc Natl Acad Sci U S A; 1993 Jul; 90(13):6260-4. PubMed ID: 8327507
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]