BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

155 related articles for article (PubMed ID: 7964930)

  • 1. Molecular dynamics simulations of oligonucleotides in solution: visualization of intrinsic curvature.
    de Souza ON; Goodfellow JM
    J Comput Aided Mol Des; 1994 Jun; 8(3):307-22. PubMed ID: 7964930
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Molecular dynamics simulations of DNA curvature and flexibility: helix phasing and premelting.
    Beveridge DL; Dixit SB; Barreiro G; Thayer KM
    Biopolymers; 2004 Feb; 73(3):380-403. PubMed ID: 14755574
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Structure and axis curvature in two dA6 x dT6 DNA oligonucleotides: comparison of molecular dynamics simulations with results from crystallography and NMR spectroscopy.
    Dixit SB; Pitici F; Beveridge DL
    Biopolymers; 2004 Dec; 75(6):468-79. PubMed ID: 15526331
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Molecular dynamics simulations of B '-DNA: sequence effects on A-tract-induced bending and flexibility.
    McConnell KJ; Beveridge DL
    J Mol Biol; 2001 Nov; 314(1):23-40. PubMed ID: 11724529
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A DNA dodecamer containing an adenine tract crystallizes in a unique lattice and exhibits a new bend.
    DiGabriele AD; Steitz TA
    J Mol Biol; 1993 Jun; 231(4):1024-39. PubMed ID: 8515463
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Structure determination and analysis of local bending in an A-tract DNA duplex: comparison of results from crystallography, nuclear magnetic resonance, and molecular dynamics simulation on d(CGCAAAAATGCG).
    Young MA; Srinivasan J; Goljer I; Kumar S; Beveridge DL; Bolton PH
    Methods Enzymol; 1995; 261():121-44. PubMed ID: 8569492
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Solution conformation of a parallel DNA triple helix with 5' and 3' triplex-duplex junctions.
    Asensio JL; Brown T; Lane AN
    Structure; 1999 Jan; 7(1):1-11. PubMed ID: 10368268
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Structure of an alternating-B DNA helix and its relationship to A-tract DNA.
    Yoon C; Privé GG; Goodsell DS; Dickerson RE
    Proc Natl Acad Sci U S A; 1988 Sep; 85(17):6332-6. PubMed ID: 3413099
    [TBL] [Abstract][Full Text] [Related]  

  • 9. 100ps molecular dynamic simulation of d(TATCACC)2.
    Mrigank ; Kothekar V
    J Biomol Struct Dyn; 1991 Jun; 8(6):1147-67. PubMed ID: 1832544
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Solution structure of the dodecamer d-(CATGGGCC-CATG)2 is B-DNA. Experimental and molecular dynamics study.
    Dornberger U; Spackovj N; Walter A; Gollmick FA; Sponer J; Fritzsche H
    J Biomol Struct Dyn; 2001 Aug; 19(1):159-74. PubMed ID: 11565847
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Persistence analysis of the static and dynamical helix deformations of DNA oligonucleotides: application to the crystal structure and molecular dynamics simulation of d(CGCGAATTCGCG)2.
    Prévost C; Louise-May S; Ravishanker G; Lavery R; Beveridge DL
    Biopolymers; 1993 Mar; 33(3):335-50. PubMed ID: 8461448
    [TBL] [Abstract][Full Text] [Related]  

  • 12. The intrinsic curvature of a 51 bp K-DNA fragment of Leishmania tarentolae: a molecular model.
    Norberto de Souza O; Goodfellow JM
    J Biomol Struct Dyn; 1998 Apr; 15(5):905-30. PubMed ID: 9619513
    [TBL] [Abstract][Full Text] [Related]  

  • 13. What is the basis of sequence-directed curvature in DNAs containing A tracts?
    Harvey SC; Dlakic M; Griffith J; Harrington R; Park K; Sprous D; Zacharias W
    J Biomol Struct Dyn; 1995 Oct; 13(2):301-7. PubMed ID: 8579789
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Three-dimensional crystal structure of the A-tract DNA dodecamer d(CGCAAATTTGCG) complexed with the minor-groove-binding drug Hoechst 33258.
    Vega MC; García Sáez I; Aymamí J; Eritja R; Van der Marel GA; Van Boom JH; Rich A; Coll M
    Eur J Biochem; 1994 Jun; 222(3):721-6. PubMed ID: 7517864
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Compensating bends in a 16-base-pair DNA oligomer containing a T(3)A(3) segment: A NMR study of global DNA curvature.
    McAteer K; Aceves-Gaona A; Michalczyk R; Buchko GW; Isern NG; Silks LA; Miller JH; Kennedy MA
    Biopolymers; 2004 Dec; 75(6):497-511. PubMed ID: 15526287
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Solution structure of an A-tract DNA bend.
    MacDonald D; Herbert K; Zhang X; Pologruto T; Lu P
    J Mol Biol; 2001 Mar; 306(5):1081-98. PubMed ID: 11237619
    [TBL] [Abstract][Full Text] [Related]  

  • 17. The crystal structure of C-C-A-T-T-A-A-T-G-G. Implications for bending of B-DNA at T-A steps.
    Goodsell DS; Kaczor-Grzeskowiak M; Dickerson RE
    J Mol Biol; 1994 May; 239(1):79-96. PubMed ID: 8196049
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Solution conformation of the (+)-cis-anti-[BP]dG adduct in a DNA duplex: intercalation of the covalently attached benzo[a]pyrenyl ring into the helix and displacement of the modified deoxyguanosine.
    Cosman M; de los Santos C; Fiala R; Hingerty BE; Ibanez V; Luna E; Harvey R; Geacintov NE; Broyde S; Patel DJ
    Biochemistry; 1993 Apr; 32(16):4145-55. PubMed ID: 8476845
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Solution conformation of [AF]dG opposite a -2 deletion site in a DNA duplex: intercalation of the covalently attached aminofluorene ring into the helix with base displacement of the C8-modified syn guanine and adjacent unpaired 3'-adenine into the major groove.
    Mao B; Hingerty BE; Broyde S; Patel DJ
    Biochemistry; 1995 Dec; 34(51):16641-53. PubMed ID: 8527437
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Bending and curvature calculations in B-DNA.
    Goodsell DS; Dickerson RE
    Nucleic Acids Res; 1994 Dec; 22(24):5497-503. PubMed ID: 7816643
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.