155 related articles for article (PubMed ID: 7964930)
21. Magnesium increases the curvature of duplex DNA that contains dA tracts.
Jerkovic B; Bolton PH
Biochemistry; 2001 Aug; 40(31):9406-11. PubMed ID: 11478910
[TBL] [Abstract][Full Text] [Related]
22. Crystal structure of CATGGCCATG and its implications for A-tract bending models.
Goodsell DS; Kopka ML; Cascio D; Dickerson RE
Proc Natl Acad Sci U S A; 1993 Apr; 90(7):2930-4. PubMed ID: 8464909
[TBL] [Abstract][Full Text] [Related]
23. Solution conformation of the (-)-cis-anti-benzo[a]pyrenyl-dG adduct opposite dC in a DNA duplex: intercalation of the covalently attached BP ring into the helix with base displacement of the modified deoxyguanosine into the major groove.
Cosman M; Hingerty BE; Luneva N; Amin S; Geacintov NE; Broyde S; Patel DJ
Biochemistry; 1996 Jul; 35(30):9850-63. PubMed ID: 8703959
[TBL] [Abstract][Full Text] [Related]
24. Solution structure of an oligodeoxynucleotide duplex containing the exocyclic lesion 3,N4-etheno-2'-deoxycytidine opposite 2'-deoxyadenosine, determined by NMR spectroscopy and restrained molecular dynamics.
Korobka A; Cullinan D; Cosman M; Grollman AP; Patel DJ; Eisenberg M; de los Santos C
Biochemistry; 1996 Oct; 35(41):13310-8. PubMed ID: 8873597
[TBL] [Abstract][Full Text] [Related]
25. Conformation and dynamics of drug-DNA intercalation.
Herzyk P; Neidle S; Goodfellow JM
J Biomol Struct Dyn; 1992 Aug; 10(1):97-139. PubMed ID: 1418749
[TBL] [Abstract][Full Text] [Related]
26. Investigation of solution structure of d(GAATTTAAATTC)2 by 1H NMR, molecular dynamics, mechanics, refinement by back-calculation of the NOESY spectrum and analysis of this structure using X-ray data.
Chuprina VP; Sletten E; Fedoroff OYu
J Biomol Struct Dyn; 1993 Feb; 10(4):693-707. PubMed ID: 8466674
[TBL] [Abstract][Full Text] [Related]
27. Conformational states of a TT mismatch from molecular dynamics simulation of duplex d (CGCGATTCGCG).
Venable RM; Widmalm G; Brooks BR; Egan W; Pastor RW
Biopolymers; 1992 Jul; 32(7):783-94. PubMed ID: 1391631
[TBL] [Abstract][Full Text] [Related]
28. Crystal lattice packing is important in determining the bend of a DNA dodecamer containing an adenine tract.
DiGabriele AD; Sanderson MR; Steitz TA
Proc Natl Acad Sci U S A; 1989 Mar; 86(6):1816-20. PubMed ID: 2928304
[TBL] [Abstract][Full Text] [Related]
29. Solution structure of a homopyrimidine: homopurine dodecamer encoded by the HIV-1 envelope gene: NMR and molecular simulation studies.
Sodano P; Hartmann B; Rose T; Wain-Hobson S; Delepierre M
Biochemistry; 1995 May; 34(20):6900-10. PubMed ID: 7756322
[TBL] [Abstract][Full Text] [Related]
30. X-ray and solution studies of DNA oligomers and implications for the structural basis of A-tract-dependent curvature.
Shatzky-Schwartz M; Arbuckle ND; Eisenstein M; Rabinovich D; Bareket-Samish A; Haran TE; Luisi BF; Shakked Z
J Mol Biol; 1997 Apr; 267(3):595-623. PubMed ID: 9126841
[TBL] [Abstract][Full Text] [Related]
31. Crystal and molecular structure of the alternating dodecamer d(GCGTACGTACGC) in the A-DNA form: comparison with the isomorphous non-alternating dodecamer d(CCGTACGTACGG).
Bingman C; Jain S; Zon G; Sundaralingam M
Nucleic Acids Res; 1992 Dec; 20(24):6637-47. PubMed ID: 1480485
[TBL] [Abstract][Full Text] [Related]
32. Theoretical study of the geometrical arrangement of GT and GA wobble pairs in two short duplexes, Proton NMR chemical shifts and interaction energy calculations.
Giessner-Prettre C; Langlet J; Caron F
J Theor Biol; 1984 Mar; 107(2):211-28. PubMed ID: 6325825
[TBL] [Abstract][Full Text] [Related]
33. Prediction of the structure of the Y+.R-.R(+)-type DNA triple helix by molecular modelling.
Laughton CA; Neidle S
Nucleic Acids Res; 1992 Dec; 20(24):6535-41. PubMed ID: 1480474
[TBL] [Abstract][Full Text] [Related]
34. Peptide nucleic acid (PNA) conformation and polymorphism in PNA-DNA and PNA-RNA hybrids.
Almarsson O; Bruice TC
Proc Natl Acad Sci U S A; 1993 Oct; 90(20):9542-6. PubMed ID: 8415738
[TBL] [Abstract][Full Text] [Related]
35. Solution structure of a pyrimidine.purine.pyrimidine DNA triplex containing T.AT, C+.GC and G.TA triples.
Radhakrishnan I; Patel DJ
Structure; 1994 Jan; 2(1):17-32. PubMed ID: 8075980
[TBL] [Abstract][Full Text] [Related]
36. Solution structure and hydration patterns of a pyrimidine.purine.pyrimidine DNA triplex containing a novel T.CG base-triple.
Radhakrishnan I; Patel DJ
J Mol Biol; 1994 Aug; 241(4):600-19. PubMed ID: 8057381
[TBL] [Abstract][Full Text] [Related]
37. Crystal structure of a mispaired dodecamer, d(CGAGAATTC(O6Me)GCG)2, containing a carcinogenic O6-methylguanine.
Ginell SL; Vojtechovsky J; Gaffney B; Jones R; Berman HM
Biochemistry; 1994 Mar; 33(12):3487-93. PubMed ID: 8142345
[TBL] [Abstract][Full Text] [Related]
38. Molecular dynamics simulations of papilloma virus E2 DNA sequences: dynamical models for oligonucleotide structures in solution.
Byun KS; Beveridge DL
Biopolymers; 2004 Feb; 73(3):369-79. PubMed ID: 14755573
[TBL] [Abstract][Full Text] [Related]
39. Structure, dynamics, and elasticity of free 16s rRNA helix 44 studied by molecular dynamics simulations.
Réblová K; Lankas F; Rázga F; Krasovska MV; Koca J; Sponer J
Biopolymers; 2006 Aug; 82(5):504-20. PubMed ID: 16538608
[TBL] [Abstract][Full Text] [Related]
40. Parallel and antiparallel (G.GC)2 triple helix fragments in a crystal structure.
Vlieghe D; Van Meervelt L; Dautant A; Gallois B; Précigoux G; Kennard O
Science; 1996 Sep; 273(5282):1702-5. PubMed ID: 8781231
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]