These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

1067 related articles for article (PubMed ID: 7968486)

  • 1. A codon-based model of nucleotide substitution for protein-coding DNA sequences.
    Goldman N; Yang Z
    Mol Biol Evol; 1994 Sep; 11(5):725-36. PubMed ID: 7968486
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Codon substitution models based on residue similarity and their applications.
    Liu X; Liu H; Guo W; Yu K
    Gene; 2012 Nov; 509(1):136-41. PubMed ID: 22902303
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Relating physicochemical properties of amino acids to variable nucleotide substitution patterns among sites.
    Yang Z
    Pac Symp Biocomput; 2000; ():81-92. PubMed ID: 10902158
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Models of amino acid substitution and applications to mitochondrial protein evolution.
    Yang Z; Nielsen R; Hasegawa M
    Mol Biol Evol; 1998 Dec; 15(12):1600-11. PubMed ID: 9866196
    [TBL] [Abstract][Full Text] [Related]  

  • 5. An empirical codon model for protein sequence evolution.
    Kosiol C; Holmes I; Goldman N
    Mol Biol Evol; 2007 Jul; 24(7):1464-79. PubMed ID: 17400572
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Variation in the pattern of nucleotide substitution across sites.
    Huelsenbeck JP; Nielsen R
    J Mol Evol; 1999 Jan; 48(1):86-93. PubMed ID: 9873080
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Rates of nucleotide substitution and mammalian nuclear gene evolution. Approximate and maximum-likelihood methods lead to different conclusions.
    Bielawski JP; Dunn KA; Yang Z
    Genetics; 2000 Nov; 156(3):1299-308. PubMed ID: 11063703
    [TBL] [Abstract][Full Text] [Related]  

  • 8. A likelihood approach for comparing synonymous and nonsynonymous nucleotide substitution rates, with application to the chloroplast genome.
    Muse SV; Gaut BS
    Mol Biol Evol; 1994 Sep; 11(5):715-24. PubMed ID: 7968485
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Selection on synonymous codons in mammalian rhodopsins: a possible role in optimizing translational processes.
    Du J; Dungan SZ; Sabouhanian A; Chang BS
    BMC Evol Biol; 2014 May; 14():96. PubMed ID: 24884412
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Detecting positively selected sites from amino Acid sequences: an implicit codon model.
    Ouyang Z; Liang J
    Annu Int Conf IEEE Eng Med Biol Soc; 2007; 2007():5302-6. PubMed ID: 18003204
    [TBL] [Abstract][Full Text] [Related]  

  • 11. An empirical examination of the utility of codon-substitution models in phylogeny reconstruction.
    Ren F; Tanaka H; Yang Z
    Syst Biol; 2005 Oct; 54(5):808-18. PubMed ID: 16243764
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Synonymous substitutions substantially improve evolutionary inference from highly diverged proteins.
    Seo TK; Kishino H
    Syst Biol; 2008 Jun; 57(3):367-77. PubMed ID: 18570032
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Nucleic acid composition, codon usage, and the rate of synonymous substitution in protein-coding genes.
    Ticher A; Graur D
    J Mol Evol; 1989 Apr; 28(4):286-98. PubMed ID: 2499685
    [TBL] [Abstract][Full Text] [Related]  

  • 14. The phylogenetic utility of the codon-degeneracy model.
    McClellan DA
    J Mol Evol; 2000 Sep; 51(3):185-93. PubMed ID: 11029063
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Selection Shapes Synonymous Stop Codon Use in Mammals.
    Seoighe C; Kiniry SJ; Peters A; Baranov PV; Yang H
    J Mol Evol; 2020 Sep; 88(7):549-561. PubMed ID: 32617614
    [TBL] [Abstract][Full Text] [Related]  

  • 16. A codon model of nucleotide substitution with selection on synonymous codon usage.
    Kubatko L; Shah P; Herbei R; Gilchrist MA
    Mol Phylogenet Evol; 2016 Jan; 94(Pt A):290-7. PubMed ID: 26358614
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Synonymous and nonsynonymous rate variation in nuclear genes of mammals.
    Yang Z; Nielsen R
    J Mol Evol; 1998 Apr; 46(4):409-18. PubMed ID: 9541535
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Standard Codon Substitution Models Overestimate Purifying Selection for Nonstationary Data.
    Kaehler BD; Yap VB; Huttley GA
    Genome Biol Evol; 2017 Jan; 9(1):134-149. PubMed ID: 28175284
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Substitution rates in Drosophila nuclear genes: implications for translational selection.
    Dunn KA; Bielawski JP; Yang Z
    Genetics; 2001 Jan; 157(1):295-305. PubMed ID: 11139510
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Advantages of a mechanistic codon substitution model for evolutionary analysis of protein-coding sequences.
    Miyazawa S
    PLoS One; 2011; 6(12):e28892. PubMed ID: 22220197
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 54.