120 related articles for article (PubMed ID: 8052641)
1. Relative binding affinities of distamycin and its analog to d(CGCAAGTTGGC).d(GCCAACTTGCG): comparison of simulation results with experiment.
Singh SB; Wemmer DE; Kollman PA
Proc Natl Acad Sci U S A; 1994 Aug; 91(16):7673-7. PubMed ID: 8052641
[TBL] [Abstract][Full Text] [Related]
2. Interaction of minor groove ligands to an AAATT/AATTT site: correlation of thermodynamic characterization and solution structure.
Rentzeperis D; Marky LA; Dwyer TJ; Geierstanger BH; Pelton JG; Wemmer DE
Biochemistry; 1995 Mar; 34(9):2937-45. PubMed ID: 7893707
[TBL] [Abstract][Full Text] [Related]
3. Structural and dynamic characterization of the heterodimeric and homodimeric complexes of distamycin and 1-methylimidazole-2-carboxamide-netropsin bound to the minor groove of DNA.
Geierstanger BH; Jacobsen JP; Mrksich M; Dervan PB; Wemmer DE
Biochemistry; 1994 Mar; 33(10):3055-62. PubMed ID: 8130219
[TBL] [Abstract][Full Text] [Related]
4. Molecular dynamics simulations and free energy calculations of netropsin and distamycin binding to an AAAAA DNA binding site.
Dolenc J; Oostenbrink C; Koller J; van Gunsteren WF
Nucleic Acids Res; 2005; 33(2):725-33. PubMed ID: 15687382
[TBL] [Abstract][Full Text] [Related]
5. Structure of d(ITITACAC) complexed with distamycin at 1.6 A resolution.
Deng J; Pan B; Sundaralingam M
Acta Crystallogr D Biol Crystallogr; 2003 Dec; 59(Pt 12):2342-4. PubMed ID: 14646114
[TBL] [Abstract][Full Text] [Related]
6. Energetic diversity of DNA minor-groove recognition by small molecules displayed through some model ligand-DNA systems.
Lah J; Vesnaver G
J Mol Biol; 2004 Sep; 342(1):73-89. PubMed ID: 15313608
[TBL] [Abstract][Full Text] [Related]
7. Two 1 : 1 binding modes for distamycin in the minor groove of d(GGCCAATTGG).
Uytterhoeven K; Sponer J; Van Meervelt L
Eur J Biochem; 2002 Jun; 269(12):2868-77. PubMed ID: 12071949
[TBL] [Abstract][Full Text] [Related]
8. An NMR study of [d(CGCGAATTCGCG)]2 containing an interstrand cross-link derived from a distamycin-pyrrole conjugate.
Fagan PA; Spielmann HP; Sigurdsson S; Rink SM; Hopkins PB; Wemmer DE
Nucleic Acids Res; 1996 Apr; 24(8):1566-73. PubMed ID: 8628693
[TBL] [Abstract][Full Text] [Related]
9. Binding of distamycin A and netropsin to the 12mer DNA duplexes containing mixed AT.GC sequences with at most five or three successive AT base pairs.
Lah J; Vesnaver G
Biochemistry; 2000 Aug; 39(31):9317-26. PubMed ID: 10924125
[TBL] [Abstract][Full Text] [Related]
10. Molecular modelling of the interaction of carbocyclic analogues of netropsin and distamycin with d(CGCGAATTCGCG)2.
Bielawski K; Bielawska A; Bartulewicz D; Rózański A
Acta Biochim Pol; 2000; 47(3):855-66. PubMed ID: 11310985
[TBL] [Abstract][Full Text] [Related]
11. Interactions of nucleic acids with distamycins. Binding of Dst-3 to d(CGTTTAAACG)2 and d(CGTACGTACG)2.
Capobianco ML; Colonna FP; Forni A; Garbesi A; Iotti S; Moretti I; Samori B; Tondelli L
Nucleic Acids Res; 1991 Apr; 19(7):1695-8. PubMed ID: 2027777
[TBL] [Abstract][Full Text] [Related]
12. A 1H-NMR study of the DNA binding characteristics of thioformyldistamycin, an amide isosteric lexitropsin.
Singh MP; Kumar S; Joseph T; Pon RT; Lown JW
Biochemistry; 1992 Jul; 31(28):6453-61. PubMed ID: 1321661
[TBL] [Abstract][Full Text] [Related]
13. Solution structure of the calicheamicin gamma 1I-DNA complex.
Kumar RA; Ikemoto N; Patel DJ
J Mol Biol; 1997 Jan; 265(2):187-201. PubMed ID: 9020982
[TBL] [Abstract][Full Text] [Related]
14. Crystal structures of the side-by-side binding of distamycin to AT-containing DNA octamers d(ICITACIC) and d(ICATATIC).
Chen X; Ramakrishnan B; Sundaralingam M
J Mol Biol; 1997 Apr; 267(5):1157-70. PubMed ID: 9150404
[TBL] [Abstract][Full Text] [Related]
15. Synthesis of two distamycin analogues and their binding mode to d(CGCAAATTTGCG)2 in the 2:1 solution complexes as determined by two-dimensional 1H-NMR.
Animati F; Arcamone FM; Conte MR; Felicetti P; Galeone A; Lombardi P; Mayol L; Paloma LG; Rossi C
J Med Chem; 1995 Mar; 38(7):1140-9. PubMed ID: 7707317
[TBL] [Abstract][Full Text] [Related]
16. Dissociation of minor groove binders from DNA: insights from metadynamics simulations.
Vargiu AV; Ruggerone P; Magistrato A; Carloni P
Nucleic Acids Res; 2008 Oct; 36(18):5910-21. PubMed ID: 18801848
[TBL] [Abstract][Full Text] [Related]
17. Heterogeneity in the actions of drugs that bind in the DNA minor groove.
Albert FG; Eckdahl TT; Fitzgerald DJ; Anderson JN
Biochemistry; 1999 Aug; 38(31):10135-46. PubMed ID: 10433722
[TBL] [Abstract][Full Text] [Related]
18. Unusual DNA binding exhibited by synthetic distamycin analogues lacking the N-terminal amide unit under high salt conditions.
Thomas M; Rao AR; Varshney U; Bhattacharya S
J Biomol Struct Dyn; 2001 Jun; 18(6):858-71. PubMed ID: 11444374
[TBL] [Abstract][Full Text] [Related]
19. Studies on cooperative binding of an extended distamycin A analogue in the minor groove of DNA by NMR spectroscopy.
Yang Y; Chen YH; Pon RT; Lown JW
Biochem Biophys Res Commun; 1996 May; 222(3):764-9. PubMed ID: 8651919
[TBL] [Abstract][Full Text] [Related]
20. Binding of AR-1-144, a tri-imidazole DNA minor groove binder, to CCGG sequence analyzed by NMR spectroscopy.
Yang XL; Kaenzig C; Lee M; Wang AH
Eur J Biochem; 1999 Aug; 263(3):646-55. PubMed ID: 10469127
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
