These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

300 related articles for article (PubMed ID: 8193951)

  • 1. Improved sensitivity of profile searches through the use of sequence weights and gap excision.
    Thompson JD; Higgins DG; Gibson TJ
    Comput Appl Biosci; 1994 Feb; 10(1):19-29. PubMed ID: 8193951
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Using CLUSTAL for multiple sequence alignments.
    Higgins DG; Thompson JD; Gibson TJ
    Methods Enzymol; 1996; 266():383-402. PubMed ID: 8743695
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Searching for distantly related protein sequences in large databases by parallel processing on a transputer machine.
    Vogt G; Argos P
    Comput Appl Biosci; 1992 Feb; 8(1):49-55. PubMed ID: 1568125
    [TBL] [Abstract][Full Text] [Related]  

  • 4. SALSA: improved protein database searching by a new algorithm for assembly of sequence fragments into gapped alignments.
    Rognes T; Seeberg E
    Bioinformatics; 1998; 14(10):839-45. PubMed ID: 9927712
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Improving the quality of twilight-zone alignments.
    Jaroszewski L; Rychlewski L; Godzik A
    Protein Sci; 2000 Aug; 9(8):1487-96. PubMed ID: 10975570
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Robust sequence alignment using evolutionary rates coupled with an amino acid substitution matrix.
    Ndhlovu A; Hazelhurst S; Durand PM
    BMC Bioinformatics; 2015 Aug; 16():255. PubMed ID: 26269100
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Using the FASTA program to search protein and DNA sequence databases.
    Pearson WR
    Methods Mol Biol; 1994; 25():365-89. PubMed ID: 8004177
    [No Abstract]   [Full Text] [Related]  

  • 8. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.
    Thompson JD; Higgins DG; Gibson TJ
    Nucleic Acids Res; 1994 Nov; 22(22):4673-80. PubMed ID: 7984417
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Comparison of methods for searching protein sequence databases.
    Pearson WR
    Protein Sci; 1995 Jun; 4(6):1145-60. PubMed ID: 7549879
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Effective protein sequence comparison.
    Pearson WR
    Methods Enzymol; 1996; 266():227-58. PubMed ID: 8743688
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Scoring profile-to-profile sequence alignments.
    Wang G; Dunbrack RL
    Protein Sci; 2004 Jun; 13(6):1612-26. PubMed ID: 15152092
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Database similarity searches.
    Plewniak F
    Methods Mol Biol; 2008; 484():361-78. PubMed ID: 18592192
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Flexible sequence similarity searching with the FASTA3 program package.
    Pearson WR
    Methods Mol Biol; 2000; 132():185-219. PubMed ID: 10547837
    [TBL] [Abstract][Full Text] [Related]  

  • 14. OXBench: a benchmark for evaluation of protein multiple sequence alignment accuracy.
    Raghava GP; Searle SM; Audley PC; Barber JD; Barton GJ
    BMC Bioinformatics; 2003 Oct; 4():47. PubMed ID: 14552658
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Pairwise sequence alignment below the twilight zone.
    Blake JD; Cohen FE
    J Mol Biol; 2001 Mar; 307(2):721-35. PubMed ID: 11254392
    [TBL] [Abstract][Full Text] [Related]  

  • 16. LITTLE KEVIN: a program for the estimation of protein homology by analysing the amino acid compositions and sequences.
    Grillasca JP; Aubert D; Planells R; Domingo N; Lafont H
    Comput Appl Biosci; 1996 Aug; 12(4):347-51. PubMed ID: 8902361
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Dynamic programming algorithms for biological sequence comparison.
    Pearson WR; Miller W
    Methods Enzymol; 1992; 210():575-601. PubMed ID: 1584052
    [TBL] [Abstract][Full Text] [Related]  

  • 18. PATMAT: a searching and extraction program for sequence, pattern and block queries and databases.
    Wallace JC; Henikoff S
    Comput Appl Biosci; 1992 Jun; 8(3):249-54. PubMed ID: 1633566
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Accuracy of structure-based sequence alignment of automatic methods.
    Kim C; Lee B
    BMC Bioinformatics; 2007 Sep; 8():355. PubMed ID: 17883866
    [TBL] [Abstract][Full Text] [Related]  

  • 20. A 3D-1D substitution matrix for protein fold recognition that includes predicted secondary structure of the sequence.
    Rice DW; Eisenberg D
    J Mol Biol; 1997 Apr; 267(4):1026-38. PubMed ID: 9135128
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 15.