These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

157 related articles for article (PubMed ID: 8268794)

  • 1. Comparison of conformational characteristics in structurally similar protein pairs.
    Flores TP; Orengo CA; Moss DS; Thornton JM
    Protein Sci; 1993 Nov; 2(11):1811-26. PubMed ID: 8268794
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Structural features can be unconserved in proteins with similar folds. An analysis of side-chain to side-chain contacts secondary structure and accessibility.
    Russell RB; Barton GJ
    J Mol Biol; 1994 Dec; 244(3):332-50. PubMed ID: 7966343
    [TBL] [Abstract][Full Text] [Related]  

  • 3. An integrated approach to the analysis and modeling of protein sequences and structures. III. A comparative study of sequence conservation in protein structural families using multiple structural alignments.
    Yang AS; Honig B
    J Mol Biol; 2000 Aug; 301(3):691-711. PubMed ID: 10966778
    [TBL] [Abstract][Full Text] [Related]  

  • 4. An integrated approach to the analysis and modeling of protein sequences and structures. II. On the relationship between sequence and structural similarity for proteins that are not obviously related in sequence.
    Yang AS; Honig B
    J Mol Biol; 2000 Aug; 301(3):679-89. PubMed ID: 10966777
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Comparison of Composer and ORCHESTRAR.
    Dolan MA; Keil M; Baker DS
    Proteins; 2008 Sep; 72(4):1243-58. PubMed ID: 18361454
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Recognition of analogous and homologous protein folds: analysis of sequence and structure conservation.
    Russell RB; Saqi MA; Sayle RA; Bates PA; Sternberg MJ
    J Mol Biol; 1997 Jun; 269(3):423-39. PubMed ID: 9199410
    [TBL] [Abstract][Full Text] [Related]  

  • 7. An integrated approach to the analysis and modeling of protein sequences and structures. I. Protein structural alignment and a quantitative measure for protein structural distance.
    Yang AS; Honig B
    J Mol Biol; 2000 Aug; 301(3):665-78. PubMed ID: 10966776
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Protein structure alignment considering phenotypic plasticity.
    Csaba G; Birzele F; Zimmer R
    Bioinformatics; 2008 Aug; 24(16):i98-104. PubMed ID: 18689847
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A 3D-1D substitution matrix for protein fold recognition that includes predicted secondary structure of the sequence.
    Rice DW; Eisenberg D
    J Mol Biol; 1997 Apr; 267(4):1026-38. PubMed ID: 9135128
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A critical assessment of comparative molecular modeling of tertiary structures of proteins.
    Mosimann S; Meleshko R; James MN
    Proteins; 1995 Nov; 23(3):301-17. PubMed ID: 8710824
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Comparison of the efficiency of evolutionary change-based and side chain orientation-based fold recognition potentials.
    Vishnepolsky B; Managadze G; Pirtskhalava M
    Proteins; 2008 Jun; 71(4):1863-78. PubMed ID: 18175309
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Homology modeling by the ICM method.
    Cardozo T; Totrov M; Abagyan R
    Proteins; 1995 Nov; 23(3):403-14. PubMed ID: 8710833
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Variable gap penalty for protein sequence-structure alignment.
    Madhusudhan MS; Marti-Renom MA; Sanchez R; Sali A
    Protein Eng Des Sel; 2006 Mar; 19(3):129-33. PubMed ID: 16423846
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Use of residue pairs in protein sequence-sequence and sequence-structure alignments.
    Jung J; Lee B
    Protein Sci; 2000 Aug; 9(8):1576-88. PubMed ID: 10975579
    [TBL] [Abstract][Full Text] [Related]  

  • 15. PFRES: protein fold classification by using evolutionary information and predicted secondary structure.
    Chen K; Kurgan L
    Bioinformatics; 2007 Nov; 23(21):2843-50. PubMed ID: 17942446
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Protein fold recognition by prediction-based threading.
    Rost B; Schneider R; Sander C
    J Mol Biol; 1997 Jul; 270(3):471-80. PubMed ID: 9237912
    [TBL] [Abstract][Full Text] [Related]  

  • 17. SPINFAST: using structure alignment profiles to enhance the accuracy and assess the reliability of protein side-chain modeling.
    Poleksic A; Danzer JF; Palmer BA; Olafson BD; Debe DA
    Proteins; 2006 Dec; 65(4):953-8. PubMed ID: 17006949
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Protein structure comparison by alignment of distance matrices.
    Holm L; Sander C
    J Mol Biol; 1993 Sep; 233(1):123-38. PubMed ID: 8377180
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Homology modeling of an RNP domain from a human RNA-binding protein: Homology-constrained energy optimization provides a criterion for distinguishing potential sequence alignments.
    Sahasrabudhe PV; Tejero R; Kitao S; Furuichi Y; Montelione GT
    Proteins; 1998 Dec; 33(4):558-66. PubMed ID: 9849939
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Identifying sequence regions undergoing conformational change via predicted continuum secondary structure.
    Bodén M; Bailey TL
    Bioinformatics; 2006 Aug; 22(15):1809-14. PubMed ID: 16720586
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.