304 related articles for article (PubMed ID: 8496967)
21. Contact interactions method: a new algorithm for protein folding simulations.
Toma L; Toma S
Protein Sci; 1996 Jan; 5(1):147-53. PubMed ID: 8771207
[TBL] [Abstract][Full Text] [Related]
22. Protein translocation through a tunnel induces changes in folding kinetics: a lattice model study.
Contreras Martínez LM; Martínez-Veracoechea FJ; Pohkarel P; Stroock AD; Escobedo FA; DeLisa MP
Biotechnol Bioeng; 2006 May; 94(1):105-17. PubMed ID: 16528757
[TBL] [Abstract][Full Text] [Related]
23. New Monte Carlo algorithms for protein folding.
Hansmann UH; Okamoto Y
Curr Opin Struct Biol; 1999 Apr; 9(2):177-83. PubMed ID: 10322208
[TBL] [Abstract][Full Text] [Related]
24. Significance of conformational biases in Monte Carlo simulations of protein folding: lessons from Metropolis-Hastings approach.
Przytycka T
Proteins; 2004 Nov; 57(2):338-44. PubMed ID: 15340921
[TBL] [Abstract][Full Text] [Related]
25. Folding small proteins via annealing stochastic approximation Monte Carlo.
Cheon S; Liang F
Biosystems; 2011 Sep; 105(3):243-9. PubMed ID: 21679746
[TBL] [Abstract][Full Text] [Related]
26. The blind search for the closed states of hinge-bending proteins.
Yesylevskyy SO; Kharkyanen VN; Demchenko AP
Proteins; 2008 May; 71(2):831-43. PubMed ID: 18004759
[TBL] [Abstract][Full Text] [Related]
27. A Monte Carlo sampling method of amino acid sequences adaptable to given main-chain atoms in the proteins.
Ogata K; Soejima K; Higo J
J Biochem; 2006 Oct; 140(4):543-52. PubMed ID: 16945938
[TBL] [Abstract][Full Text] [Related]
28. Factors governing the foldability of proteins.
Klimov DK; Thirumalai D
Proteins; 1996 Dec; 26(4):411-41. PubMed ID: 8990496
[TBL] [Abstract][Full Text] [Related]
29. Annealing contour Monte Carlo algorithm for structure optimization in an off-lattice protein model.
Liang F
J Chem Phys; 2004 Apr; 120(14):6756-63. PubMed ID: 15267570
[TBL] [Abstract][Full Text] [Related]
30. Biopolymer structure simulation and optimization via fragment regrowth Monte Carlo.
Zhang J; Kou SC; Liu JS
J Chem Phys; 2007 Jun; 126(22):225101. PubMed ID: 17581081
[TBL] [Abstract][Full Text] [Related]
31. Membrane adsorption, folding, insertion and translocation of synthetic trans-membrane peptides.
Ulmschneider MB; Ulmschneider JP
Mol Membr Biol; 2008 Apr; 25(3):245-57. PubMed ID: 18428040
[TBL] [Abstract][Full Text] [Related]
32. Importance of chirality and reduced flexibility of protein side chains: a study with square and tetrahedral lattice models.
Zhang J; Chen Y; Chen R; Liang J
J Chem Phys; 2004 Jul; 121(1):592-603. PubMed ID: 15260581
[TBL] [Abstract][Full Text] [Related]
33. Generalized-ensemble algorithms for molecular simulations of biopolymers.
Mitsutake A; Sugita Y; Okamoto Y
Biopolymers; 2001; 60(2):96-123. PubMed ID: 11455545
[TBL] [Abstract][Full Text] [Related]
34. Exploration of compact protein conformations using the guided replication Monte Carlo method.
Solomon JE; Liney D
Biopolymers; 1995 Nov; 36(5):579-97. PubMed ID: 7578950
[TBL] [Abstract][Full Text] [Related]
35. Monte Carlo minimization with thermalization for global optimization of polypeptide conformations in cartesian coordinate space.
Caflisch A; Niederer P; Anliker M
Proteins; 1992 Sep; 14(1):102-9. PubMed ID: 1409559
[TBL] [Abstract][Full Text] [Related]
36. Excluded volume in protein side-chain packing.
Kussell E; Shimada J; Shakhnovich EI
J Mol Biol; 2001 Aug; 311(1):183-93. PubMed ID: 11469867
[TBL] [Abstract][Full Text] [Related]
37. On the relation between native geometry and conformational plasticity.
Faísca PF; Gomes CM
Biophys Chem; 2008 Dec; 138(3):99-106. PubMed ID: 18823691
[TBL] [Abstract][Full Text] [Related]
38. Docking of protein molecular surfaces with evolutionary trace analysis.
Kanamori E; Murakami Y; Tsuchiya Y; Standley DM; Nakamura H; Kinoshita K
Proteins; 2007 Dec; 69(4):832-8. PubMed ID: 17803239
[TBL] [Abstract][Full Text] [Related]
39. Identifying the protein folding nucleus using molecular dynamics.
Dokholyan NV; Buldyrev SV; Stanley HE; Shakhnovich EI
J Mol Biol; 2000 Mar; 296(5):1183-8. PubMed ID: 10698625
[TBL] [Abstract][Full Text] [Related]
40. Pathways to folding, nucleation events, and native geometry.
Travasso RD; Telo da Gama MM; Faísca PF
J Chem Phys; 2007 Oct; 127(14):145106. PubMed ID: 17935450
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]