232 related articles for article (PubMed ID: 8555172)
21. beta-hairpin folding and stability: molecular dynamics simulations of designed peptides in aqueous solution.
Santiveri CM; Jiménez MA; Rico M; Van Gunsteren WF; Daura X
J Pept Sci; 2004 Sep; 10(9):546-65. PubMed ID: 15473263
[TBL] [Abstract][Full Text] [Related]
22. The preferred conformation of the tripeptide Ala-Phe-Ala in water is an inverse gamma-turn: implications for protein folding and drug design.
Motta A; Reches M; Pappalardo L; Andreotti G; Gazit E
Biochemistry; 2005 Nov; 44(43):14170-8. PubMed ID: 16245933
[TBL] [Abstract][Full Text] [Related]
23. Solution structures of a 30-residue amino-terminal domain of the carp granulin-1 protein and its amino-terminally truncated 3-30 subfragment: implications for the conformational stability of the stack of two beta-hairpins.
Vranken WF; James S; Bennett HP; Ni F
Proteins; 2002 Apr; 47(1):14-24. PubMed ID: 11870861
[TBL] [Abstract][Full Text] [Related]
24. Conformational features of a hexapeptide model Ac-TGAAKA-NH2 corresponding to a hydrated alpha helical segment from glyceraldehyde 3-phosphate dehydrogenase: implications for the role of turns in helix folding.
Sasidhar YU; Ramakrishna V
Indian J Biochem Biophys; 2000 Feb; 37(1):34-44. PubMed ID: 10983411
[TBL] [Abstract][Full Text] [Related]
25. Understanding the roles of amino acid residues in tertiary structure formation of chignolin by using molecular dynamics simulation.
Terada T; Satoh D; Mikawa T; Ito Y; Shimizu K
Proteins; 2008 Nov; 73(3):621-31. PubMed ID: 18473359
[TBL] [Abstract][Full Text] [Related]
26. Tryptophan rich peptides: influence of indole rings on backbone conformation.
Mahalakshmi R; Sengupta A; Raghothama S; Shamala N; Balaram P
Biopolymers; 2007; 88(1):36-54. PubMed ID: 17091496
[TBL] [Abstract][Full Text] [Related]
27. Solution conformation and amyloid-like fibril formation of a polar peptide derived from a beta-hairpin in the OspA single-layer beta-sheet.
Ohnishi S; Koide A; Koide S
J Mol Biol; 2000 Aug; 301(2):477-89. PubMed ID: 10926522
[TBL] [Abstract][Full Text] [Related]
28. A recipe for designing water-soluble, beta-sheet-forming peptides.
Mayo KH; Ilyina E; Park H
Protein Sci; 1996 Jul; 5(7):1301-15. PubMed ID: 8819163
[TBL] [Abstract][Full Text] [Related]
29. Design of a peptide hairpin containing a central three-residue loop.
Rai R; Raghothama S; Balaram P
J Am Chem Soc; 2006 Mar; 128(8):2675-81. PubMed ID: 16492054
[TBL] [Abstract][Full Text] [Related]
30. Transformation of an alpha-helix peptide into a beta-hairpin induced by addition of a fragment results in creation of a coexisting state.
Araki M; Tamura A
Proteins; 2007 Mar; 66(4):860-8. PubMed ID: 17177204
[TBL] [Abstract][Full Text] [Related]
31. Molecular conformation and packing of peptide beta hairpins in the solid state: structures of two synthetic octapeptides containing 1-aminocycloalkane-1-carboxylic acid residues at the i+2 position of the beta turn.
Harini VV; Aravinda S; Rai R; Shamala N; Balaram P
Chemistry; 2005 Jun; 11(12):3609-20. PubMed ID: 15812872
[TBL] [Abstract][Full Text] [Related]
32. Role of different β-turns in β-hairpin conformation and stability studied by optical spectroscopy.
Wu L; McElheny D; Setnicka V; Hilario J; Keiderling TA
Proteins; 2012 Jan; 80(1):44-60. PubMed ID: 21989967
[TBL] [Abstract][Full Text] [Related]
33. Three-dimensional solution structure of mu-conotoxin GIIIB, a specific blocker of skeletal muscle sodium channels.
Hill JM; Alewood PF; Craik DJ
Biochemistry; 1996 Jul; 35(27):8824-35. PubMed ID: 8688418
[TBL] [Abstract][Full Text] [Related]
34. Free energy determinants of secondary structure formation: II. Antiparallel beta-sheets.
Yang AS; Honig B
J Mol Biol; 1995 Sep; 252(3):366-76. PubMed ID: 7563057
[TBL] [Abstract][Full Text] [Related]
35. Beta-hairpin folding by a model amyloid peptide in solution and at an interface.
Knecht V
J Phys Chem B; 2008 Aug; 112(31):9476-83. PubMed ID: 18593146
[TBL] [Abstract][Full Text] [Related]
36. Conformational analysis of a set of peptides corresponding to the entire primary sequence of the N-terminal domain of the ribosomal protein L9: evidence for stable native-like secondary structure in the unfolded state.
Luisi DL; Wu WJ; Raleigh DP
J Mol Biol; 1999 Mar; 287(2):395-407. PubMed ID: 10080901
[TBL] [Abstract][Full Text] [Related]
37. Solution structure of Eucommia antifungal peptide: a novel structural model distinct with a five-disulfide motif.
Huang RH; Xiang Y; Tu GZ; Zhang Y; Wang DC
Biochemistry; 2004 May; 43(20):6005-12. PubMed ID: 15147184
[TBL] [Abstract][Full Text] [Related]
38. Modulation of intrinsic phi,psi propensities of amino acids by neighbouring residues in the coil regions of protein structures: NMR analysis and dissection of a beta-hairpin peptide.
Griffiths-Jones SR; Sharman GJ; Maynard AJ; Searle MS
J Mol Biol; 1998 Dec; 284(5):1597-609. PubMed ID: 9878373
[TBL] [Abstract][Full Text] [Related]
39. Synthesis, secondary structure and folding of the bend region of lung surfactant protein B.
Waring AJ; Faull KF; Leung C; Chang-Chien A; Mercado P; Taeusch HW; Gordon LM
Pept Res; 1996; 9(1):28-39. PubMed ID: 8727481
[TBL] [Abstract][Full Text] [Related]
40. Free energy surfaces of beta-hairpin and alpha-helical peptides generated by replica exchange molecular dynamics with the AGBNP implicit solvent model.
Felts AK; Harano Y; Gallicchio E; Levy RM
Proteins; 2004 Aug; 56(2):310-21. PubMed ID: 15211514
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
