These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

203 related articles for article (PubMed ID: 8580316)

  • 21. Experimental pK(a) values of buried residues: analysis with continuum methods and role of water penetration.
    Fitch CA; Karp DA; Lee KK; Stites WE; Lattman EE; García-Moreno E B
    Biophys J; 2002 Jun; 82(6):3289-304. PubMed ID: 12023252
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Modeling of protein conformational fluctuations in pKa predictions.
    Zhou HX; Vijayakumar M
    J Mol Biol; 1997 Apr; 267(4):1002-11. PubMed ID: 9135126
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Proton binding to proteins: a free-energy component analysis using a dielectric continuum model.
    Archontis G; Simonson T
    Biophys J; 2005 Jun; 88(6):3888-904. PubMed ID: 15821163
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Combining conformational flexibility and continuum electrostatics for calculating pK(a)s in proteins.
    Georgescu RE; Alexov EG; Gunner MR
    Biophys J; 2002 Oct; 83(4):1731-48. PubMed ID: 12324397
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Calculations of proton-binding thermodynamics in proteins.
    Beroza P; Case DA
    Methods Enzymol; 1998; 295():170-89. PubMed ID: 9750219
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Differences in electrostatic properties at antibody-antigen binding sites: implications for specificity and cross-reactivity.
    Sinha N; Mohan S; Lipschultz CA; Smith-Gill SJ
    Biophys J; 2002 Dec; 83(6):2946-68. PubMed ID: 12496069
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Self-consistent field approach to protein structure and stability. I: pH dependence of electrostatic contribution.
    Dimitrov RA; Crichton RR
    Proteins; 1997 Apr; 27(4):576-96. PubMed ID: 9141137
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Relationship between ion pair geometries and electrostatic strengths in proteins.
    Kumar S; Nussinov R
    Biophys J; 2002 Sep; 83(3):1595-612. PubMed ID: 12202384
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Electrostatic calculations of side-chain pK(a) values in myoglobin and comparison with NMR data for histidines.
    Bashford D; Case DA; Dalvit C; Tennant L; Wright PE
    Biochemistry; 1993 Aug; 32(31):8045-56. PubMed ID: 8347606
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Computer modeling of electrostatic steering and orientational effects in antibody-antigen association.
    Kozack RE; d'Mello MJ; Subramaniam S
    Biophys J; 1995 Mar; 68(3):807-14. PubMed ID: 7756548
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Prediction of pKa shifts in proteins using a combination of molecular mechanical and continuum solvent calculations.
    Kuhn B; Kollman PA; Stahl M
    J Comput Chem; 2004 Nov; 25(15):1865-72. PubMed ID: 15376253
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Calculated coupling of electron and proton transfer in the photosynthetic reaction center of Rhodopseudomonas viridis.
    Lancaster CR; Michel H; Honig B; Gunner MR
    Biophys J; 1996 Jun; 70(6):2469-92. PubMed ID: 8744288
    [TBL] [Abstract][Full Text] [Related]  

  • 33. A parameterized, continuum electrostatic model for predicting protein pKa values.
    Burger SK; Ayers PW
    Proteins; 2011 Jul; 79(7):2044-52. PubMed ID: 21557315
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Measurement and modelling of sequence-specific pKa values of lysine residues in calbindin D9k.
    Kesvatera T; Jönsson B; Thulin E; Linse S
    J Mol Biol; 1996 Jun; 259(4):828-39. PubMed ID: 8683586
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Proton and electron transfer to the secondary quinone (QB) in bacterial reaction centers: the effect of changing the electrostatics in the vicinity of QB by interchanging asp and glu at the L212 and L213 sites.
    Paddock ML; Feher G; Okamura MY
    Biochemistry; 1997 Nov; 36(46):14238-49. PubMed ID: 9369497
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Exploring conformational changes coupled to ionization states using a hybrid Rosetta-MCCE protocol.
    Song Y
    Proteins; 2011 Dec; 79(12):3356-63. PubMed ID: 22072519
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Conformational study of some 4'-substituted 2-(phenylselanyl)-2-(ethylsulfanyl)-acetophenones.
    Cerqueira CR; Olivato PR; Dal Colle M
    Spectrochim Acta A Mol Biomol Spectrosc; 2015 Mar; 139():495-504. PubMed ID: 25576948
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Calculation of weak protein-protein interactions: the pH dependence of the second virial coefficient.
    Elcock AH; McCammon JA
    Biophys J; 2001 Feb; 80(2):613-25. PubMed ID: 11159430
    [TBL] [Abstract][Full Text] [Related]  

  • 39. An empirical model for electrostatic interactions in proteins incorporating multiple geometry-dependent dielectric constants.
    Wisz MS; Hellinga HW
    Proteins; 2003 May; 51(3):360-77. PubMed ID: 12696048
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Analysing the pH-dependent properties of proteins using pKa calculations.
    Nielsen JE
    J Mol Graph Model; 2007 Jan; 25(5):691-9. PubMed ID: 16815056
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 11.