186 related articles for article (PubMed ID: 8692930)
1. Binding site size limit of the 2:1 pyrrole-imidazole polyamide-DNA motif.
Kelly JJ; Baird EE; Dervan PB
Proc Natl Acad Sci U S A; 1996 Jul; 93(14):6981-5. PubMed ID: 8692930
[TBL] [Abstract][Full Text] [Related]
2. Recognition of the DNA minor groove by pyrrole-imidazole polyamides: comparison of desmethyl- and N-methylpyrrole.
Bremer RE; Szewczyk JW; Baird EE; Dervan PB
Bioorg Med Chem; 2000 Aug; 8(8):1947-55. PubMed ID: 11003140
[TBL] [Abstract][Full Text] [Related]
3. Effects of the A.T/T.A degeneracy of pyrrole--imidazole polyamide recognition in the minor groove of DNA.
White S; Baird EE; Dervan PB
Biochemistry; 1996 Sep; 35(38):12532-7. PubMed ID: 8823190
[TBL] [Abstract][Full Text] [Related]
4. Effects of the N-terminal acylamido group of imidazole- and pyrrole-containing polyamides on DNA sequence specificity and binding affinity.
Westrate L; Mackay H; Brown T; Nguyen B; Kluza J; Wilson WD; Lee M; Hartley JA
Biochemistry; 2009 Jun; 48(24):5679-88. PubMed ID: 19419200
[TBL] [Abstract][Full Text] [Related]
5. Recognition of DNA by designed ligands at subnanomolar concentrations.
Trauger JW; Baird EE; Dervan PB
Nature; 1996 Aug; 382(6591):559-61. PubMed ID: 8700233
[TBL] [Abstract][Full Text] [Related]
6. Alternative heterocycles for DNA recognition: an N-methylpyrazole/N-methylpyrrole pair specifies for A.T/T.A base pairs.
Nguyen DH; Szewczyk JW; Baird EE; Dervan PB
Bioorg Med Chem; 2001 Jan; 9(1):7-17. PubMed ID: 11197348
[TBL] [Abstract][Full Text] [Related]
7. Cyclic polyamides for recognition in the minor groove of DNA.
Cho J; Parks ME; Dervan PB
Proc Natl Acad Sci U S A; 1995 Oct; 92(22):10389-92. PubMed ID: 7479790
[TBL] [Abstract][Full Text] [Related]
8. Discrimination of A/T sequences in the minor groove of DNA within a cyclic polyamide motif.
Melander C; Herman DM; Dervan PB
Chemistry; 2000 Dec; 6(24):4487-97. PubMed ID: 11192081
[TBL] [Abstract][Full Text] [Related]
9. Binding of hairpin pyrrole and imidazole polyamides to DNA: relationship between torsion angle and association rate constants.
Han YW; Matsumoto T; Yokota H; Kashiwazaki G; Morinaga H; Hashiya K; Bando T; Harada Y; Sugiyama H
Nucleic Acids Res; 2012 Dec; 40(22):11510-7. PubMed ID: 23042247
[TBL] [Abstract][Full Text] [Related]
10. Sequence-specific DNA binding by long hairpin pyrrole-imidazole polyamides containing an 8-amino-3,6-dioxaoctanoic acid unit.
Sawatani Y; Kashiwazaki G; Chandran A; Asamitsu S; Guo C; Sato S; Hashiya K; Bando T; Sugiyama H
Bioorg Med Chem; 2016 Aug; 24(16):3603-11. PubMed ID: 27301681
[TBL] [Abstract][Full Text] [Related]
11. On the pairing rules for recognition in the minor groove of DNA by pyrrole-imidazole polyamides.
White S; Baird EE; Dervan PB
Chem Biol; 1997 Aug; 4(8):569-78. PubMed ID: 9281524
[TBL] [Abstract][Full Text] [Related]
12. Binding of a hairpin polyamide in the minor groove of DNA: sequence-specific enthalpic discrimination.
Pilch DS; Poklar N; Gelfand CA; Law SM; Breslauer KJ; Baird EE; Dervan PB
Proc Natl Acad Sci U S A; 1996 Aug; 93(16):8306-11. PubMed ID: 8710866
[TBL] [Abstract][Full Text] [Related]
13. Extended hairpin polyamide motif for sequence-specific recognition in the minor groove of DNA.
Trauger JW; Baird EE; Dervan PB
Chem Biol; 1996 May; 3(5):369-77. PubMed ID: 8807866
[TBL] [Abstract][Full Text] [Related]
14. DNA recognition: design, synthesis and biophysical characteristics of pyrrole(H) based polyamides.
Chavda S; Mulder K; Brown T; Mackay H; Babu B; Westrate L; Ferguson A; Lin S; Kiakos K; Ramos JP; Munde M; Wilson WD; Hartley JA; Lee M
Med Chem; 2010 May; 6(3):150-8. PubMed ID: 20632976
[TBL] [Abstract][Full Text] [Related]
15. Effect of single pyrrole replacement with β-alanine on DNA binding affinity and sequence specificity of hairpin pyrrole/imidazole polyamides targeting 5'-GCGC-3'.
Han YW; Kashiwazaki G; Morinaga H; Matsumoto T; Hashiya K; Bando T; Harada Y; Sugiyama H
Bioorg Med Chem; 2013 Sep; 21(17):5436-41. PubMed ID: 23810670
[TBL] [Abstract][Full Text] [Related]
16. Sequence recognition in the minor groove of DNA by covalently linked formamido imidazole-pyrrole-imidazole polyamides: effect of H-pin linkage and linker length on selectivity and affinity.
O'Hare CC; Uthe P; Mackay H; Blackmon K; Jones J; Brown T; Nguyen B; Wilson WD; Lee M; Hartley JA
Biochemistry; 2007 Oct; 46(42):11661-70. PubMed ID: 17910471
[TBL] [Abstract][Full Text] [Related]
17. Novel diamino imidazole and pyrrole-containing polyamides: Synthesis and DNA binding studies of mono- and diamino-phenyl-ImPy*Im polyamides designed to target 5'-ACGCGT-3'.
Satam V; Babu B; Chavda S; Savagian M; Sjoholm R; Tzou S; Ramos J; Liu Y; Kiakos K; Lin S; David Wilson W; Hartley JA; Lee M
Bioorg Med Chem; 2012 Jan; 20(2):693-701. PubMed ID: 22222156
[TBL] [Abstract][Full Text] [Related]
18. Anti-repression of RNA polymerase II transcription by pyrrole-imidazole polyamides.
Dickinson LA; Trauger JW; Baird EE; Ghazal P; Dervan PB; Gottesfeld JM
Biochemistry; 1999 Aug; 38(33):10801-7. PubMed ID: 10451376
[TBL] [Abstract][Full Text] [Related]
19. Synthesis and biophysical evaluation of minor-groove binding C-terminus modified pyrrole and imidazole triamide analogs of distamycin.
Brown T; Taherbhai Z; Sexton J; Sutterfield A; Turlington M; Jones J; Stallings L; Stewart M; Buchmueller K; Mackay H; O'hare C; Kluza J; Nguyen B; Wilson D; Lee M; Hartley JA
Bioorg Med Chem; 2007 Jan; 15(1):474-83. PubMed ID: 17035029
[TBL] [Abstract][Full Text] [Related]
20. The application of fluorescence-conjugated pyrrole/imidazole polyamides in the characterization of protein-DNA complex formation.
Han YW; Sugiyama H; Harada Y
Biomater Sci; 2016 Mar; 4(3):391-9. PubMed ID: 26734690
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
